Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.34■□□□□ 0.85
TRIM56Q9BRZ2 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.34■□□□□ 0.85
TRIM56Q9BRZ2 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
TRIM56Q9BRZ2 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.34■□□□□ 0.85
TRIM56Q9BRZ2 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM56Q9BRZ2 AC087633.2-202ENST00000565166 1439 ntBASIC20.34■□□□□ 0.85
TRIM56Q9BRZ2 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM56Q9BRZ2 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
TRIM56Q9BRZ2 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRIM56Q9BRZ2 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRIM56Q9BRZ2 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
TRIM56Q9BRZ2 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRIM56Q9BRZ2 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
TRIM56Q9BRZ2 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
TRIM56Q9BRZ2 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRIM56Q9BRZ2 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.85
TRIM56Q9BRZ2 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRIM56Q9BRZ2 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.33■□□□□ 0.85
TRIM56Q9BRZ2 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.33■□□□□ 0.85
TRIM56Q9BRZ2 DUX4L16-201ENST00000555130 1264 ntBASIC20.33■□□□□ 0.85
TRIM56Q9BRZ2 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRIM56Q9BRZ2 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRIM56Q9BRZ2 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRIM56Q9BRZ2 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRIM56Q9BRZ2 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TRIM56Q9BRZ2 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.33■□□□□ 0.84
TRIM56Q9BRZ2 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRIM56Q9BRZ2 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM56Q9BRZ2 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM56Q9BRZ2 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM56Q9BRZ2 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM56Q9BRZ2 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM56Q9BRZ2 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
TRIM56Q9BRZ2 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
TRIM56Q9BRZ2 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM56Q9BRZ2 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.32■□□□□ 0.84
TRIM56Q9BRZ2 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM56Q9BRZ2 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
TRIM56Q9BRZ2 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM56Q9BRZ2 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM56Q9BRZ2 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.32■□□□□ 0.84
TRIM56Q9BRZ2 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.32■□□□□ 0.84
TRIM56Q9BRZ2 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
TRIM56Q9BRZ2 AC022517.1-201ENST00000592429 346 ntBASIC20.32■□□□□ 0.84
TRIM56Q9BRZ2 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM56Q9BRZ2 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM56Q9BRZ2 BX119927.1-201ENST00000636596 1552 ntBASIC20.32■□□□□ 0.84
TRIM56Q9BRZ2 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.32■□□□□ 0.84
TRIM56Q9BRZ2 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
TRIM56Q9BRZ2 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM56Q9BRZ2 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.32■□□□□ 0.84
TRIM56Q9BRZ2 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM56Q9BRZ2 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM56Q9BRZ2 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
TRIM56Q9BRZ2 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM56Q9BRZ2 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM56Q9BRZ2 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM56Q9BRZ2 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM56Q9BRZ2 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.31■□□□□ 0.84
TRIM56Q9BRZ2 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.31■□□□□ 0.84
TRIM56Q9BRZ2 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM56Q9BRZ2 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM56Q9BRZ2 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM56Q9BRZ2 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
TRIM56Q9BRZ2 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM56Q9BRZ2 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM56Q9BRZ2 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM56Q9BRZ2 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.31■□□□□ 0.84
TRIM56Q9BRZ2 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.31■□□□□ 0.84
TRIM56Q9BRZ2 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.31■□□□□ 0.84
TRIM56Q9BRZ2 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
TRIM56Q9BRZ2 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM56Q9BRZ2 AC013268.1-206ENST00000638368 961 ntBASIC20.31■□□□□ 0.84
TRIM56Q9BRZ2 AC112229.1-201ENST00000639295 961 ntBASIC20.31■□□□□ 0.84
TRIM56Q9BRZ2 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
TRIM56Q9BRZ2 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.31■□□□□ 0.84
TRIM56Q9BRZ2 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.3■□□□□ 0.84
TRIM56Q9BRZ2 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM56Q9BRZ2 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM56Q9BRZ2 AC068338.2-201ENST00000563278 1430 ntBASIC20.3■□□□□ 0.84
TRIM56Q9BRZ2 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.3■□□□□ 0.84
TRIM56Q9BRZ2 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM56Q9BRZ2 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM56Q9BRZ2 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM56Q9BRZ2 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.3■□□□□ 0.84
TRIM56Q9BRZ2 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM56Q9BRZ2 AC007322.4-201ENST00000509611 723 ntBASIC20.3■□□□□ 0.84
TRIM56Q9BRZ2 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
TRIM56Q9BRZ2 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.3■□□□□ 0.84
TRIM56Q9BRZ2 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM56Q9BRZ2 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM56Q9BRZ2 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM56Q9BRZ2 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM56Q9BRZ2 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.3■□□□□ 0.84
TRIM56Q9BRZ2 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM56Q9BRZ2 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM56Q9BRZ2 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM56Q9BRZ2 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.29■□□□□ 0.84
TRIM56Q9BRZ2 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.29■□□□□ 0.84
TRIM56Q9BRZ2 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms