Protein–RNA interactions for Protein: Q9BQJ4

TMEM47, Transmembrane protein 47, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47Q9BQJ4 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TMEM47Q9BQJ4 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TMEM47Q9BQJ4 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TMEM47Q9BQJ4 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TMEM47Q9BQJ4 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC23.29■■□□□ 1.32
TMEM47Q9BQJ4 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
TMEM47Q9BQJ4 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TMEM47Q9BQJ4 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC23.29■■□□□ 1.32
TMEM47Q9BQJ4 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC23.29■■□□□ 1.32
TMEM47Q9BQJ4 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TMEM47Q9BQJ4 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TMEM47Q9BQJ4 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC23.28■■□□□ 1.32
TMEM47Q9BQJ4 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TMEM47Q9BQJ4 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC23.28■■□□□ 1.32
TMEM47Q9BQJ4 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
TMEM47Q9BQJ4 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TMEM47Q9BQJ4 KRASP1-201ENST00000407852 552 ntBASIC23.28■■□□□ 1.32
TMEM47Q9BQJ4 AC239809.2-201ENST00000415381 517 ntBASIC23.28■■□□□ 1.32
TMEM47Q9BQJ4 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC23.28■■□□□ 1.32
TMEM47Q9BQJ4 AC093827.2-201ENST00000512654 315 ntBASIC23.28■■□□□ 1.32
TMEM47Q9BQJ4 PNN-205ENST00000556530 601 ntTSL 2 BASIC23.28■■□□□ 1.32
TMEM47Q9BQJ4 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC23.28■■□□□ 1.32
TMEM47Q9BQJ4 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC23.28■■□□□ 1.32
TMEM47Q9BQJ4 SPIB-206ENST00000596074 847 ntTSL 2 BASIC23.28■■□□□ 1.32
TMEM47Q9BQJ4 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TMEM47Q9BQJ4 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.28■■□□□ 1.32
TMEM47Q9BQJ4 GABARAPL3-202ENST00000624044 1851 ntBASIC23.28■■□□□ 1.32
TMEM47Q9BQJ4 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
TMEM47Q9BQJ4 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TMEM47Q9BQJ4 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TMEM47Q9BQJ4 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
TMEM47Q9BQJ4 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC23.27■■□□□ 1.32
TMEM47Q9BQJ4 BAALC-201ENST00000297574 801 ntTSL 3 BASIC23.27■■□□□ 1.32
TMEM47Q9BQJ4 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC23.27■■□□□ 1.32
TMEM47Q9BQJ4 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
TMEM47Q9BQJ4 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC23.27■■□□□ 1.32
TMEM47Q9BQJ4 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC23.27■■□□□ 1.32
TMEM47Q9BQJ4 AL121906.2-201ENST00000621597 723 ntBASIC23.27■■□□□ 1.32
TMEM47Q9BQJ4 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TMEM47Q9BQJ4 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC23.27■■□□□ 1.32
TMEM47Q9BQJ4 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC23.27■■□□□ 1.32
TMEM47Q9BQJ4 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
TMEM47Q9BQJ4 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
TMEM47Q9BQJ4 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
TMEM47Q9BQJ4 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
TMEM47Q9BQJ4 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC23.27■■□□□ 1.32
TMEM47Q9BQJ4 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC23.26■■□□□ 1.31
TMEM47Q9BQJ4 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC23.26■■□□□ 1.31
TMEM47Q9BQJ4 KRT16P6-202ENST00000425692 1426 ntBASIC23.26■■□□□ 1.31
TMEM47Q9BQJ4 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
TMEM47Q9BQJ4 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
TMEM47Q9BQJ4 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
TMEM47Q9BQJ4 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TMEM47Q9BQJ4 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
TMEM47Q9BQJ4 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
TMEM47Q9BQJ4 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
TMEM47Q9BQJ4 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC23.26■■□□□ 1.31
TMEM47Q9BQJ4 USP36-216ENST00000589424 970 ntTSL 5 BASIC23.26■■□□□ 1.31
TMEM47Q9BQJ4 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
TMEM47Q9BQJ4 AL162377.1-201ENST00000618844 1793 ntBASIC23.26■■□□□ 1.31
TMEM47Q9BQJ4 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TMEM47Q9BQJ4 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
TMEM47Q9BQJ4 AL157384.1-201ENST00000445995 2473 ntBASIC23.25■■□□□ 1.31
TMEM47Q9BQJ4 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC23.25■■□□□ 1.31
TMEM47Q9BQJ4 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TMEM47Q9BQJ4 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
TMEM47Q9BQJ4 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC23.25■■□□□ 1.31
TMEM47Q9BQJ4 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
TMEM47Q9BQJ4 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
TMEM47Q9BQJ4 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC23.25■■□□□ 1.31
TMEM47Q9BQJ4 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC23.25■■□□□ 1.31
TMEM47Q9BQJ4 TK2-204ENST00000525974 1178 ntTSL 2 BASIC23.25■■□□□ 1.31
TMEM47Q9BQJ4 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC23.25■■□□□ 1.31
TMEM47Q9BQJ4 PRKY-204ENST00000533551 1019 ntBASIC23.25■■□□□ 1.31
TMEM47Q9BQJ4 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC23.25■■□□□ 1.31
TMEM47Q9BQJ4 BX119927.1-201ENST00000636596 1552 ntBASIC23.25■■□□□ 1.31
TMEM47Q9BQJ4 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC23.25■■□□□ 1.31
TMEM47Q9BQJ4 MME-217ENST00000616757 1315 ntTSL 5 BASIC23.25■■□□□ 1.31
TMEM47Q9BQJ4 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
TMEM47Q9BQJ4 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
TMEM47Q9BQJ4 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TMEM47Q9BQJ4 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC23.25■■□□□ 1.31
TMEM47Q9BQJ4 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TMEM47Q9BQJ4 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC23.25■■□□□ 1.31
TMEM47Q9BQJ4 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC23.24■■□□□ 1.31
TMEM47Q9BQJ4 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC23.24■■□□□ 1.31
TMEM47Q9BQJ4 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TMEM47Q9BQJ4 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TMEM47Q9BQJ4 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC23.24■■□□□ 1.31
TMEM47Q9BQJ4 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TMEM47Q9BQJ4 CALM3-202ENST00000391918 702 ntTSL 2 BASIC23.24■■□□□ 1.31
TMEM47Q9BQJ4 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TMEM47Q9BQJ4 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC23.24■■□□□ 1.31
TMEM47Q9BQJ4 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC23.24■■□□□ 1.31
TMEM47Q9BQJ4 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TMEM47Q9BQJ4 AC110285.5-201ENST00000611501 352 ntBASIC23.24■■□□□ 1.31
TMEM47Q9BQJ4 AP006294.2-201ENST00000641667 209 ntBASIC23.24■■□□□ 1.31
TMEM47Q9BQJ4 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC23.24■■□□□ 1.31
TMEM47Q9BQJ4 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TMEM47Q9BQJ4 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms