Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC15.11■□□□□ 0.01
VGLL1Q99990 TMEM179-206ENST00000616017 1645 ntBASIC15.11■□□□□ 0.01
VGLL1Q99990 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC15.11■□□□□ 0.01
VGLL1Q99990 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VGLL1Q99990 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
VGLL1Q99990 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VGLL1Q99990 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
VGLL1Q99990 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VGLL1Q99990 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC15.11■□□□□ 0.01
VGLL1Q99990 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
VGLL1Q99990 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC15.11■□□□□ 0.01
VGLL1Q99990 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC15.11■□□□□ 0.01
VGLL1Q99990 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VGLL1Q99990 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VGLL1Q99990 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC15.11■□□□□ 0.01
VGLL1Q99990 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC15.11■□□□□ 0.01
VGLL1Q99990 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
VGLL1Q99990 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC15.11■□□□□ 0.01
VGLL1Q99990 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
VGLL1Q99990 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
VGLL1Q99990 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
VGLL1Q99990 AC019069.1-201ENST00000610008 1333 ntBASIC15.11■□□□□ 0.01
VGLL1Q99990 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC15.11■□□□□ 0.01
VGLL1Q99990 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VGLL1Q99990 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC15.11■□□□□ 0.01
VGLL1Q99990 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VGLL1Q99990 AC026471.1-201ENST00000564629 3026 ntBASIC15.11■□□□□ 0.01
VGLL1Q99990 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
VGLL1Q99990 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
VGLL1Q99990 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VGLL1Q99990 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VGLL1Q99990 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VGLL1Q99990 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC15.1■□□□□ 0.01
VGLL1Q99990 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
VGLL1Q99990 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC15.1■□□□□ 0.01
VGLL1Q99990 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC15.1■□□□□ 0.01
VGLL1Q99990 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VGLL1Q99990 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VGLL1Q99990 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VGLL1Q99990 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VGLL1Q99990 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC15.1■□□□□ 0.01
VGLL1Q99990 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC15.1■□□□□ 0.01
VGLL1Q99990 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VGLL1Q99990 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC15.1■□□□□ 0.01
VGLL1Q99990 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC15.1■□□□□ 0.01
VGLL1Q99990 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC15.1■□□□□ 0.01
VGLL1Q99990 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC15.1■□□□□ 0.01
VGLL1Q99990 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
VGLL1Q99990 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
VGLL1Q99990 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC15.1■□□□□ 0.01
VGLL1Q99990 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VGLL1Q99990 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC15.1■□□□□ 0.01
VGLL1Q99990 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC15.1■□□□□ 0.01
VGLL1Q99990 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC15.1■□□□□ 0.01
VGLL1Q99990 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VGLL1Q99990 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VGLL1Q99990 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VGLL1Q99990 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VGLL1Q99990 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC15.1■□□□□ 0.01
VGLL1Q99990 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC15.1■□□□□ 0.01
VGLL1Q99990 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC15.1■□□□□ 0.01
VGLL1Q99990 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
VGLL1Q99990 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VGLL1Q99990 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VGLL1Q99990 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VGLL1Q99990 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VGLL1Q99990 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
VGLL1Q99990 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
VGLL1Q99990 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VGLL1Q99990 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
VGLL1Q99990 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VGLL1Q99990 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
VGLL1Q99990 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VGLL1Q99990 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
VGLL1Q99990 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC15.09■□□□□ 0.01
VGLL1Q99990 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VGLL1Q99990 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
VGLL1Q99990 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
VGLL1Q99990 YBX1P1-201ENST00000445822 960 ntBASIC15.09■□□□□ 0.01
VGLL1Q99990 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC15.09■□□□□ 0.01
VGLL1Q99990 CD44-222ENST00000526025 1052 ntTSL 2 BASIC15.09■□□□□ 0.01
VGLL1Q99990 KRT18P14-201ENST00000534205 1250 ntBASIC15.09■□□□□ 0.01
VGLL1Q99990 SLC7A5P1-201ENST00000568957 537 ntBASIC15.09■□□□□ 0.01
VGLL1Q99990 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
VGLL1Q99990 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
VGLL1Q99990 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC15.09■□□□□ 0.01
VGLL1Q99990 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VGLL1Q99990 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC15.09■□□□□ 0.01
VGLL1Q99990 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC15.09■□□□□ 0.01
VGLL1Q99990 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
VGLL1Q99990 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
VGLL1Q99990 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
VGLL1Q99990 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
VGLL1Q99990 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VGLL1Q99990 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC15.09■□□□□ 0.01
VGLL1Q99990 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC15.09■□□□□ 0.01
VGLL1Q99990 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
VGLL1Q99990 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
VGLL1Q99990 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
VGLL1Q99990 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms