Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TIMP4Q99727 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.33■□□□□ 0.52
TIMP4Q99727 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TIMP4Q99727 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
TIMP4Q99727 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TIMP4Q99727 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TIMP4Q99727 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TIMP4Q99727 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TIMP4Q99727 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TIMP4Q99727 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TIMP4Q99727 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TIMP4Q99727 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TIMP4Q99727 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TIMP4Q99727 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
TIMP4Q99727 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TIMP4Q99727 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TIMP4Q99727 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.32■□□□□ 0.52
TIMP4Q99727 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
TIMP4Q99727 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TIMP4Q99727 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
TIMP4Q99727 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.32■□□□□ 0.52
TIMP4Q99727 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.32■□□□□ 0.52
TIMP4Q99727 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.32■□□□□ 0.52
TIMP4Q99727 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
TIMP4Q99727 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TIMP4Q99727 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TIMP4Q99727 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
TIMP4Q99727 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TIMP4Q99727 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.32■□□□□ 0.52
TIMP4Q99727 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TIMP4Q99727 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TIMP4Q99727 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TIMP4Q99727 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TIMP4Q99727 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TIMP4Q99727 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.31■□□□□ 0.52
TIMP4Q99727 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TIMP4Q99727 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TIMP4Q99727 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.31■□□□□ 0.52
TIMP4Q99727 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.31■□□□□ 0.52
TIMP4Q99727 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TIMP4Q99727 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TIMP4Q99727 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TIMP4Q99727 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
TIMP4Q99727 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
TIMP4Q99727 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TIMP4Q99727 AC128676.1-201ENST00000454392 318 ntBASIC18.31■□□□□ 0.52
TIMP4Q99727 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
TIMP4Q99727 UNC93B4-201ENST00000505679 747 ntBASIC18.31■□□□□ 0.52
TIMP4Q99727 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
TIMP4Q99727 AC008403.3-201ENST00000598924 454 ntBASIC18.31■□□□□ 0.52
TIMP4Q99727 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.31■□□□□ 0.52
TIMP4Q99727 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TIMP4Q99727 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TIMP4Q99727 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
TIMP4Q99727 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TIMP4Q99727 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TIMP4Q99727 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TIMP4Q99727 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
TIMP4Q99727 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.3■□□□□ 0.52
TIMP4Q99727 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TIMP4Q99727 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TIMP4Q99727 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TIMP4Q99727 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TIMP4Q99727 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TIMP4Q99727 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TIMP4Q99727 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.3■□□□□ 0.52
TIMP4Q99727 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TIMP4Q99727 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TIMP4Q99727 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.3■□□□□ 0.52
TIMP4Q99727 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
TIMP4Q99727 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TIMP4Q99727 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TIMP4Q99727 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TIMP4Q99727 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.3■□□□□ 0.52
TIMP4Q99727 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
TIMP4Q99727 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TIMP4Q99727 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TIMP4Q99727 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TIMP4Q99727 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TIMP4Q99727 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.29■□□□□ 0.52
TIMP4Q99727 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.29■□□□□ 0.52
TIMP4Q99727 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TIMP4Q99727 AC066615.1-201ENST00000640911 628 ntBASIC18.29■□□□□ 0.52
TIMP4Q99727 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.29■□□□□ 0.52
TIMP4Q99727 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TIMP4Q99727 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TIMP4Q99727 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TIMP4Q99727 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TIMP4Q99727 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.28■□□□□ 0.52
TIMP4Q99727 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.28■□□□□ 0.52
TIMP4Q99727 RNF165-205ENST00000588679 2904 ntBASIC18.28■□□□□ 0.52
TIMP4Q99727 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TIMP4Q99727 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TIMP4Q99727 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TIMP4Q99727 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TIMP4Q99727 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.28■□□□□ 0.52
TIMP4Q99727 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
TIMP4Q99727 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.28■□□□□ 0.52
TIMP4Q99727 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TIMP4Q99727 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms