Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.21■□□□□ 0.99
PCDHB18PQ96TA0 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHB18PQ96TA0 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHB18PQ96TA0 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHB18PQ96TA0 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHB18PQ96TA0 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
PCDHB18PQ96TA0 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHB18PQ96TA0 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.21■□□□□ 0.99
PCDHB18PQ96TA0 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.99
PCDHB18PQ96TA0 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
PCDHB18PQ96TA0 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.2■□□□□ 0.99
PCDHB18PQ96TA0 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHB18PQ96TA0 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHB18PQ96TA0 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
PCDHB18PQ96TA0 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHB18PQ96TA0 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHB18PQ96TA0 BX276092.2-201ENST00000417668 665 ntBASIC21.2■□□□□ 0.98
PCDHB18PQ96TA0 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHB18PQ96TA0 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.2■□□□□ 0.98
PCDHB18PQ96TA0 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHB18PQ96TA0 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHB18PQ96TA0 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHB18PQ96TA0 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHB18PQ96TA0 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDHB18PQ96TA0 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
PCDHB18PQ96TA0 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.2■□□□□ 0.98
PCDHB18PQ96TA0 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
PCDHB18PQ96TA0 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
PCDHB18PQ96TA0 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.19■□□□□ 0.98
PCDHB18PQ96TA0 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHB18PQ96TA0 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.19■□□□□ 0.98
PCDHB18PQ96TA0 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHB18PQ96TA0 GPX1P1-201ENST00000388829 606 ntBASIC21.19■□□□□ 0.98
PCDHB18PQ96TA0 AC083906.2-201ENST00000511578 360 ntBASIC21.19■□□□□ 0.98
PCDHB18PQ96TA0 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.19■□□□□ 0.98
PCDHB18PQ96TA0 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
PCDHB18PQ96TA0 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21.19■□□□□ 0.98
PCDHB18PQ96TA0 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHB18PQ96TA0 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHB18PQ96TA0 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHB18PQ96TA0 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHB18PQ96TA0 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.18■□□□□ 0.98
PCDHB18PQ96TA0 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.18■□□□□ 0.98
PCDHB18PQ96TA0 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHB18PQ96TA0 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.18■□□□□ 0.98
PCDHB18PQ96TA0 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
PCDHB18PQ96TA0 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
PCDHB18PQ96TA0 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21.18■□□□□ 0.98
PCDHB18PQ96TA0 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHB18PQ96TA0 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.18■□□□□ 0.98
PCDHB18PQ96TA0 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.18■□□□□ 0.98
PCDHB18PQ96TA0 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHB18PQ96TA0 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.18■□□□□ 0.98
PCDHB18PQ96TA0 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.18■□□□□ 0.98
PCDHB18PQ96TA0 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHB18PQ96TA0 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHB18PQ96TA0 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHB18PQ96TA0 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHB18PQ96TA0 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHB18PQ96TA0 TREX1-205ENST00000625293 1783 ntBASIC21.18■□□□□ 0.98
PCDHB18PQ96TA0 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.18■□□□□ 0.98
PCDHB18PQ96TA0 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHB18PQ96TA0 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHB18PQ96TA0 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC21.17■□□□□ 0.98
PCDHB18PQ96TA0 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.17■□□□□ 0.98
PCDHB18PQ96TA0 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHB18PQ96TA0 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHB18PQ96TA0 AC007952.6-201ENST00000573168 2673 ntBASIC21.17■□□□□ 0.98
PCDHB18PQ96TA0 AC003957.1-201ENST00000625108 2673 ntBASIC21.17■□□□□ 0.98
PCDHB18PQ96TA0 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHB18PQ96TA0 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHB18PQ96TA0 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHB18PQ96TA0 MIPEPP3-201ENST00000412105 444 ntBASIC21.17■□□□□ 0.98
PCDHB18PQ96TA0 GUSBP6-202ENST00000438529 1198 ntBASIC21.17■□□□□ 0.98
PCDHB18PQ96TA0 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.17■□□□□ 0.98
PCDHB18PQ96TA0 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.17■□□□□ 0.98
PCDHB18PQ96TA0 AC023632.3-201ENST00000521633 145 ntBASIC21.17■□□□□ 0.98
PCDHB18PQ96TA0 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHB18PQ96TA0 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHB18PQ96TA0 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.17■□□□□ 0.98
PCDHB18PQ96TA0 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHB18PQ96TA0 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.17■□□□□ 0.98
PCDHB18PQ96TA0 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHB18PQ96TA0 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
PCDHB18PQ96TA0 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHB18PQ96TA0 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHB18PQ96TA0 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHB18PQ96TA0 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
PCDHB18PQ96TA0 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHB18PQ96TA0 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.16■□□□□ 0.98
PCDHB18PQ96TA0 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.16■□□□□ 0.98
PCDHB18PQ96TA0 AC009237.14-201ENST00000609975 1594 ntBASIC21.16■□□□□ 0.98
PCDHB18PQ96TA0 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.16■□□□□ 0.98
PCDHB18PQ96TA0 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHB18PQ96TA0 KRT16P6-202ENST00000425692 1426 ntBASIC21.16■□□□□ 0.98
PCDHB18PQ96TA0 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.16■□□□□ 0.98
PCDHB18PQ96TA0 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.16■□□□□ 0.98
PCDHB18PQ96TA0 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.16■□□□□ 0.98
PCDHB18PQ96TA0 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
PCDHB18PQ96TA0 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms