Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
HMCN1Q96RW7 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HMCN1Q96RW7 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HMCN1Q96RW7 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HMCN1Q96RW7 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HMCN1Q96RW7 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC6.16□□□□□ -1.42
HMCN1Q96RW7 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC6.16□□□□□ -1.42
HMCN1Q96RW7 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HMCN1Q96RW7 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HMCN1Q96RW7 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC6.16□□□□□ -1.42
HMCN1Q96RW7 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HMCN1Q96RW7 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HMCN1Q96RW7 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HMCN1Q96RW7 AC007322.3-201ENST00000426526 701 ntBASIC6.16□□□□□ -1.42
HMCN1Q96RW7 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HMCN1Q96RW7 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
HMCN1Q96RW7 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC6.16□□□□□ -1.42
HMCN1Q96RW7 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC6.16□□□□□ -1.42
HMCN1Q96RW7 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC6.16□□□□□ -1.42
HMCN1Q96RW7 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC6.16□□□□□ -1.42
HMCN1Q96RW7 AC092329.2-201ENST00000598402 547 ntBASIC6.16□□□□□ -1.42
HMCN1Q96RW7 AL035252.4-201ENST00000624174 288 ntBASIC6.16□□□□□ -1.42
HMCN1Q96RW7 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC6.16□□□□□ -1.42
HMCN1Q96RW7 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC6.16□□□□□ -1.42
HMCN1Q96RW7 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HMCN1Q96RW7 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HMCN1Q96RW7 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
HMCN1Q96RW7 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
HMCN1Q96RW7 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HMCN1Q96RW7 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC6.16□□□□□ -1.42
HMCN1Q96RW7 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HMCN1Q96RW7 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HMCN1Q96RW7 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC6.16□□□□□ -1.42
HMCN1Q96RW7 PAWRP1-201ENST00000451083 565 ntBASIC6.16□□□□□ -1.42
HMCN1Q96RW7 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC6.16□□□□□ -1.42
HMCN1Q96RW7 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC6.16□□□□□ -1.42
HMCN1Q96RW7 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC6.16□□□□□ -1.42
HMCN1Q96RW7 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC6.16□□□□□ -1.42
HMCN1Q96RW7 ABBA01031661.1-201ENST00000634362 1253 ntBASIC6.16□□□□□ -1.42
HMCN1Q96RW7 AC141257.4-201ENST00000634557 245 ntBASIC6.16□□□□□ -1.42
HMCN1Q96RW7 AC136944.6-201ENST00000634818 245 ntBASIC6.16□□□□□ -1.42
HMCN1Q96RW7 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HMCN1Q96RW7 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC6.16□□□□□ -1.42
HMCN1Q96RW7 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
HMCN1Q96RW7 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
HMCN1Q96RW7 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC6.16□□□□□ -1.42
HMCN1Q96RW7 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HMCN1Q96RW7 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
HMCN1Q96RW7 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC6.16□□□□□ -1.42
HMCN1Q96RW7 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC6.16□□□□□ -1.42
HMCN1Q96RW7 PGAM5P1-201ENST00000518923 814 ntBASIC6.16□□□□□ -1.42
HMCN1Q96RW7 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC6.16□□□□□ -1.42
HMCN1Q96RW7 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
HMCN1Q96RW7 AL023803.3-201ENST00000615559 522 ntBASIC6.16□□□□□ -1.42
HMCN1Q96RW7 MIR1199-201ENST00000621445 119 ntBASIC6.16□□□□□ -1.42
HMCN1Q96RW7 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HMCN1Q96RW7 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HMCN1Q96RW7 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HMCN1Q96RW7 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.42
HMCN1Q96RW7 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
HMCN1Q96RW7 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
HMCN1Q96RW7 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
HMCN1Q96RW7 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
HMCN1Q96RW7 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
HMCN1Q96RW7 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC6.15□□□□□ -1.42
HMCN1Q96RW7 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC6.15□□□□□ -1.42
HMCN1Q96RW7 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC6.15□□□□□ -1.42
HMCN1Q96RW7 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC6.15□□□□□ -1.42
HMCN1Q96RW7 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC6.15□□□□□ -1.42
HMCN1Q96RW7 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
HMCN1Q96RW7 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC6.15□□□□□ -1.42
HMCN1Q96RW7 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC6.15□□□□□ -1.42
HMCN1Q96RW7 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC6.15□□□□□ -1.42
HMCN1Q96RW7 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC6.15□□□□□ -1.42
HMCN1Q96RW7 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC6.15□□□□□ -1.42
HMCN1Q96RW7 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
HMCN1Q96RW7 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC6.15□□□□□ -1.42
HMCN1Q96RW7 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
HMCN1Q96RW7 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
HMCN1Q96RW7 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
HMCN1Q96RW7 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
HMCN1Q96RW7 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC6.15□□□□□ -1.42
HMCN1Q96RW7 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
HMCN1Q96RW7 HLA-G-202ENST00000376815 851 ntBASIC6.15□□□□□ -1.42
HMCN1Q96RW7 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
HMCN1Q96RW7 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC6.15□□□□□ -1.42
HMCN1Q96RW7 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
HMCN1Q96RW7 AL353719.1-201ENST00000566847 864 ntBASIC6.15□□□□□ -1.42
HMCN1Q96RW7 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
HMCN1Q96RW7 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
HMCN1Q96RW7 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
HMCN1Q96RW7 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
HMCN1Q96RW7 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
HMCN1Q96RW7 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC6.15□□□□□ -1.42
HMCN1Q96RW7 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC6.15□□□□□ -1.42
HMCN1Q96RW7 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
HMCN1Q96RW7 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
HMCN1Q96RW7 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
HMCN1Q96RW7 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
HMCN1Q96RW7 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC6.15□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms