Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MS4A4EQ96PG1 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MS4A4EQ96PG1 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
MS4A4EQ96PG1 AC092666.2-201ENST00000613287 246 ntBASIC18.64■□□□□ 0.57
MS4A4EQ96PG1 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
MS4A4EQ96PG1 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
MS4A4EQ96PG1 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MS4A4EQ96PG1 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MS4A4EQ96PG1 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MS4A4EQ96PG1 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
MS4A4EQ96PG1 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MS4A4EQ96PG1 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
MS4A4EQ96PG1 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.63■□□□□ 0.57
MS4A4EQ96PG1 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
MS4A4EQ96PG1 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MS4A4EQ96PG1 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MS4A4EQ96PG1 AFG3L1P-217ENST00000557444 2447 ntBASIC18.63■□□□□ 0.57
MS4A4EQ96PG1 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MS4A4EQ96PG1 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
MS4A4EQ96PG1 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.63■□□□□ 0.57
MS4A4EQ96PG1 SLC29A4P1-201ENST00000398760 971 ntBASIC18.63■□□□□ 0.57
MS4A4EQ96PG1 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.63■□□□□ 0.57
MS4A4EQ96PG1 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.63■□□□□ 0.57
MS4A4EQ96PG1 NCF1B-203ENST00000435988 1254 ntBASIC18.63■□□□□ 0.57
MS4A4EQ96PG1 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MS4A4EQ96PG1 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.63■□□□□ 0.57
MS4A4EQ96PG1 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MS4A4EQ96PG1 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.63■□□□□ 0.57
MS4A4EQ96PG1 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MS4A4EQ96PG1 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MS4A4EQ96PG1 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
MS4A4EQ96PG1 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
MS4A4EQ96PG1 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.63■□□□□ 0.57
MS4A4EQ96PG1 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MS4A4EQ96PG1 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.63■□□□□ 0.57
MS4A4EQ96PG1 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
MS4A4EQ96PG1 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MS4A4EQ96PG1 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MS4A4EQ96PG1 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MS4A4EQ96PG1 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
MS4A4EQ96PG1 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MS4A4EQ96PG1 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MS4A4EQ96PG1 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.62■□□□□ 0.57
MS4A4EQ96PG1 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.62■□□□□ 0.57
MS4A4EQ96PG1 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MS4A4EQ96PG1 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
MS4A4EQ96PG1 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MS4A4EQ96PG1 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MS4A4EQ96PG1 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MS4A4EQ96PG1 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MS4A4EQ96PG1 GPX1P1-201ENST00000388829 606 ntBASIC18.62■□□□□ 0.57
MS4A4EQ96PG1 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MS4A4EQ96PG1 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
MS4A4EQ96PG1 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.62■□□□□ 0.57
MS4A4EQ96PG1 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.62■□□□□ 0.57
MS4A4EQ96PG1 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.62■□□□□ 0.57
MS4A4EQ96PG1 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.62■□□□□ 0.57
MS4A4EQ96PG1 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
MS4A4EQ96PG1 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
MS4A4EQ96PG1 AC092118.2-201ENST00000613495 667 ntBASIC18.62■□□□□ 0.57
MS4A4EQ96PG1 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.62■□□□□ 0.57
MS4A4EQ96PG1 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.62■□□□□ 0.57
MS4A4EQ96PG1 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MS4A4EQ96PG1 TMEM179-206ENST00000616017 1645 ntBASIC18.62■□□□□ 0.57
MS4A4EQ96PG1 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MS4A4EQ96PG1 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MS4A4EQ96PG1 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MS4A4EQ96PG1 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
MS4A4EQ96PG1 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MS4A4EQ96PG1 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.62■□□□□ 0.57
MS4A4EQ96PG1 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MS4A4EQ96PG1 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MS4A4EQ96PG1 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.61■□□□□ 0.57
MS4A4EQ96PG1 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MS4A4EQ96PG1 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MS4A4EQ96PG1 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MS4A4EQ96PG1 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MS4A4EQ96PG1 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MS4A4EQ96PG1 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
MS4A4EQ96PG1 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
MS4A4EQ96PG1 GUSBP6-202ENST00000438529 1198 ntBASIC18.61■□□□□ 0.57
MS4A4EQ96PG1 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MS4A4EQ96PG1 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.61■□□□□ 0.57
MS4A4EQ96PG1 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
MS4A4EQ96PG1 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.61■□□□□ 0.57
MS4A4EQ96PG1 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.61■□□□□ 0.57
MS4A4EQ96PG1 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MS4A4EQ96PG1 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MS4A4EQ96PG1 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
MS4A4EQ96PG1 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
MS4A4EQ96PG1 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MS4A4EQ96PG1 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
MS4A4EQ96PG1 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MS4A4EQ96PG1 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.6■□□□□ 0.57
MS4A4EQ96PG1 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
MS4A4EQ96PG1 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MS4A4EQ96PG1 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MS4A4EQ96PG1 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
MS4A4EQ96PG1 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MS4A4EQ96PG1 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms