Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
NSMCE2Q96MF7 PBX2P1-201ENST00000493219 1291 ntBASIC18.83■□□□□ 0.6
NSMCE2Q96MF7 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.83■□□□□ 0.6
NSMCE2Q96MF7 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.83■□□□□ 0.6
NSMCE2Q96MF7 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.83■□□□□ 0.6
NSMCE2Q96MF7 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NSMCE2Q96MF7 FAM21FP-204ENST00000608637 956 ntBASIC18.83■□□□□ 0.6
NSMCE2Q96MF7 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
NSMCE2Q96MF7 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NSMCE2Q96MF7 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
NSMCE2Q96MF7 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.83■□□□□ 0.6
NSMCE2Q96MF7 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.83■□□□□ 0.6
NSMCE2Q96MF7 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
NSMCE2Q96MF7 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
NSMCE2Q96MF7 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NSMCE2Q96MF7 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
NSMCE2Q96MF7 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NSMCE2Q96MF7 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.82■□□□□ 0.6
NSMCE2Q96MF7 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NSMCE2Q96MF7 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NSMCE2Q96MF7 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NSMCE2Q96MF7 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NSMCE2Q96MF7 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
NSMCE2Q96MF7 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.82■□□□□ 0.6
NSMCE2Q96MF7 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.82■□□□□ 0.6
NSMCE2Q96MF7 AL355001.2-201ENST00000620617 1191 ntBASIC18.82■□□□□ 0.6
NSMCE2Q96MF7 AL358852.1-201ENST00000623174 1268 ntBASIC18.82■□□□□ 0.6
NSMCE2Q96MF7 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NSMCE2Q96MF7 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
NSMCE2Q96MF7 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.82■□□□□ 0.6
NSMCE2Q96MF7 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.82■□□□□ 0.6
NSMCE2Q96MF7 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
NSMCE2Q96MF7 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NSMCE2Q96MF7 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NSMCE2Q96MF7 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.82■□□□□ 0.6
NSMCE2Q96MF7 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.82■□□□□ 0.6
NSMCE2Q96MF7 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NSMCE2Q96MF7 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NSMCE2Q96MF7 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NSMCE2Q96MF7 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.81■□□□□ 0.6
NSMCE2Q96MF7 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
NSMCE2Q96MF7 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
NSMCE2Q96MF7 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.81■□□□□ 0.6
NSMCE2Q96MF7 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
NSMCE2Q96MF7 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
NSMCE2Q96MF7 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NSMCE2Q96MF7 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NSMCE2Q96MF7 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NSMCE2Q96MF7 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.81■□□□□ 0.6
NSMCE2Q96MF7 EDA-201ENST00000338901 1233 ntBASIC18.81■□□□□ 0.6
NSMCE2Q96MF7 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
NSMCE2Q96MF7 AC007322.3-201ENST00000426526 701 ntBASIC18.81■□□□□ 0.6
NSMCE2Q96MF7 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NSMCE2Q96MF7 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.81■□□□□ 0.6
NSMCE2Q96MF7 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NSMCE2Q96MF7 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NSMCE2Q96MF7 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
NSMCE2Q96MF7 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NSMCE2Q96MF7 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.81■□□□□ 0.6
NSMCE2Q96MF7 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NSMCE2Q96MF7 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
NSMCE2Q96MF7 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NSMCE2Q96MF7 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
NSMCE2Q96MF7 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.81■□□□□ 0.6
NSMCE2Q96MF7 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.81■□□□□ 0.6
NSMCE2Q96MF7 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.8■□□□□ 0.6
NSMCE2Q96MF7 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NSMCE2Q96MF7 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NSMCE2Q96MF7 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NSMCE2Q96MF7 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
NSMCE2Q96MF7 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NSMCE2Q96MF7 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
NSMCE2Q96MF7 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NSMCE2Q96MF7 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NSMCE2Q96MF7 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NSMCE2Q96MF7 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
NSMCE2Q96MF7 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.8■□□□□ 0.6
NSMCE2Q96MF7 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NSMCE2Q96MF7 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.8■□□□□ 0.6
NSMCE2Q96MF7 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.8■□□□□ 0.6
NSMCE2Q96MF7 SLC7A5P2-201ENST00000553010 536 ntBASIC18.8■□□□□ 0.6
NSMCE2Q96MF7 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
NSMCE2Q96MF7 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.8■□□□□ 0.6
NSMCE2Q96MF7 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.8■□□□□ 0.6
NSMCE2Q96MF7 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NSMCE2Q96MF7 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.8■□□□□ 0.6
NSMCE2Q96MF7 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NSMCE2Q96MF7 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NSMCE2Q96MF7 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NSMCE2Q96MF7 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NSMCE2Q96MF7 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.79■□□□□ 0.6
NSMCE2Q96MF7 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.79■□□□□ 0.6
NSMCE2Q96MF7 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.79■□□□□ 0.6
NSMCE2Q96MF7 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.79■□□□□ 0.6
NSMCE2Q96MF7 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.79■□□□□ 0.6
NSMCE2Q96MF7 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NSMCE2Q96MF7 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NSMCE2Q96MF7 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
NSMCE2Q96MF7 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
NSMCE2Q96MF7 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms