Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
ECHDC3Q96DC8 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.02■□□□□ 0.8
ECHDC3Q96DC8 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
ECHDC3Q96DC8 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ECHDC3Q96DC8 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ECHDC3Q96DC8 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ECHDC3Q96DC8 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ECHDC3Q96DC8 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.02■□□□□ 0.79
ECHDC3Q96DC8 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
ECHDC3Q96DC8 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ECHDC3Q96DC8 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.01■□□□□ 0.79
ECHDC3Q96DC8 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.01■□□□□ 0.79
ECHDC3Q96DC8 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.01■□□□□ 0.79
ECHDC3Q96DC8 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ECHDC3Q96DC8 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
ECHDC3Q96DC8 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.01■□□□□ 0.79
ECHDC3Q96DC8 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.01■□□□□ 0.79
ECHDC3Q96DC8 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.01■□□□□ 0.79
ECHDC3Q96DC8 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ECHDC3Q96DC8 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
ECHDC3Q96DC8 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ECHDC3Q96DC8 GCSHP5-201ENST00000443090 522 ntBASIC20.01■□□□□ 0.79
ECHDC3Q96DC8 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.01■□□□□ 0.79
ECHDC3Q96DC8 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ECHDC3Q96DC8 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.01■□□□□ 0.79
ECHDC3Q96DC8 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ECHDC3Q96DC8 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
ECHDC3Q96DC8 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ECHDC3Q96DC8 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ECHDC3Q96DC8 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ECHDC3Q96DC8 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.01■□□□□ 0.79
ECHDC3Q96DC8 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ECHDC3Q96DC8 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ECHDC3Q96DC8 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20■□□□□ 0.79
ECHDC3Q96DC8 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
ECHDC3Q96DC8 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20■□□□□ 0.79
ECHDC3Q96DC8 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
ECHDC3Q96DC8 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ECHDC3Q96DC8 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
ECHDC3Q96DC8 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20■□□□□ 0.79
ECHDC3Q96DC8 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20■□□□□ 0.79
ECHDC3Q96DC8 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20■□□□□ 0.79
ECHDC3Q96DC8 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20■□□□□ 0.79
ECHDC3Q96DC8 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20■□□□□ 0.79
ECHDC3Q96DC8 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
ECHDC3Q96DC8 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20■□□□□ 0.79
ECHDC3Q96DC8 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20■□□□□ 0.79
ECHDC3Q96DC8 AL121906.2-201ENST00000621597 723 ntBASIC20■□□□□ 0.79
ECHDC3Q96DC8 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
ECHDC3Q96DC8 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20■□□□□ 0.79
ECHDC3Q96DC8 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
ECHDC3Q96DC8 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20■□□□□ 0.79
ECHDC3Q96DC8 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ECHDC3Q96DC8 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
ECHDC3Q96DC8 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
ECHDC3Q96DC8 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ECHDC3Q96DC8 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.99■□□□□ 0.79
ECHDC3Q96DC8 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.99■□□□□ 0.79
ECHDC3Q96DC8 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ECHDC3Q96DC8 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ECHDC3Q96DC8 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ECHDC3Q96DC8 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
ECHDC3Q96DC8 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ECHDC3Q96DC8 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
ECHDC3Q96DC8 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.99■□□□□ 0.79
ECHDC3Q96DC8 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.99■□□□□ 0.79
ECHDC3Q96DC8 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
ECHDC3Q96DC8 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.99■□□□□ 0.79
ECHDC3Q96DC8 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.99■□□□□ 0.79
ECHDC3Q96DC8 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.99■□□□□ 0.79
ECHDC3Q96DC8 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.99■□□□□ 0.79
ECHDC3Q96DC8 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
ECHDC3Q96DC8 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ECHDC3Q96DC8 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
ECHDC3Q96DC8 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ECHDC3Q96DC8 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ECHDC3Q96DC8 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ECHDC3Q96DC8 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ECHDC3Q96DC8 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ECHDC3Q96DC8 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.98■□□□□ 0.79
ECHDC3Q96DC8 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.98■□□□□ 0.79
ECHDC3Q96DC8 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.98■□□□□ 0.79
ECHDC3Q96DC8 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.98■□□□□ 0.79
ECHDC3Q96DC8 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
ECHDC3Q96DC8 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.98■□□□□ 0.79
ECHDC3Q96DC8 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.98■□□□□ 0.79
ECHDC3Q96DC8 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.98■□□□□ 0.79
ECHDC3Q96DC8 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.98■□□□□ 0.79
ECHDC3Q96DC8 AL359736.2-201ENST00000621992 437 ntBASIC19.98■□□□□ 0.79
ECHDC3Q96DC8 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ECHDC3Q96DC8 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
ECHDC3Q96DC8 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
ECHDC3Q96DC8 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ECHDC3Q96DC8 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ECHDC3Q96DC8 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.98■□□□□ 0.79
ECHDC3Q96DC8 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
ECHDC3Q96DC8 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
ECHDC3Q96DC8 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.98■□□□□ 0.79
ECHDC3Q96DC8 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ECHDC3Q96DC8 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms