Protein–RNA interactions for Protein: Q96CC6

RHBDF1, Inactive rhomboid protein 1, humanhuman

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1Q96CC6 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.46■□□□□ 0.71
RHBDF1Q96CC6 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
RHBDF1Q96CC6 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RHBDF1Q96CC6 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.7
RHBDF1Q96CC6 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RHBDF1Q96CC6 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
RHBDF1Q96CC6 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.45■□□□□ 0.7
RHBDF1Q96CC6 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RHBDF1Q96CC6 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RHBDF1Q96CC6 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.45■□□□□ 0.7
RHBDF1Q96CC6 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
RHBDF1Q96CC6 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.45■□□□□ 0.7
RHBDF1Q96CC6 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RHBDF1Q96CC6 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.45■□□□□ 0.7
RHBDF1Q96CC6 AC006970.2-201ENST00000450065 779 ntBASIC19.45■□□□□ 0.7
RHBDF1Q96CC6 AC083906.2-201ENST00000511578 360 ntBASIC19.45■□□□□ 0.7
RHBDF1Q96CC6 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.45■□□□□ 0.7
RHBDF1Q96CC6 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.45■□□□□ 0.7
RHBDF1Q96CC6 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
RHBDF1Q96CC6 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RHBDF1Q96CC6 AL121832.2-201ENST00000610979 668 ntBASIC19.45■□□□□ 0.7
RHBDF1Q96CC6 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RHBDF1Q96CC6 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RHBDF1Q96CC6 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RHBDF1Q96CC6 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RHBDF1Q96CC6 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RHBDF1Q96CC6 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RHBDF1Q96CC6 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RHBDF1Q96CC6 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.44■□□□□ 0.7
RHBDF1Q96CC6 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.44■□□□□ 0.7
RHBDF1Q96CC6 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RHBDF1Q96CC6 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RHBDF1Q96CC6 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.44■□□□□ 0.7
RHBDF1Q96CC6 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RHBDF1Q96CC6 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
RHBDF1Q96CC6 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RHBDF1Q96CC6 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.44■□□□□ 0.7
RHBDF1Q96CC6 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.44■□□□□ 0.7
RHBDF1Q96CC6 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RHBDF1Q96CC6 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.44■□□□□ 0.7
RHBDF1Q96CC6 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
RHBDF1Q96CC6 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RHBDF1Q96CC6 AC023632.3-201ENST00000521633 145 ntBASIC19.44■□□□□ 0.7
RHBDF1Q96CC6 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.44■□□□□ 0.7
RHBDF1Q96CC6 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.44■□□□□ 0.7
RHBDF1Q96CC6 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RHBDF1Q96CC6 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
RHBDF1Q96CC6 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RHBDF1Q96CC6 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RHBDF1Q96CC6 KRT16P6-202ENST00000425692 1426 ntBASIC19.43■□□□□ 0.7
RHBDF1Q96CC6 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
RHBDF1Q96CC6 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.43■□□□□ 0.7
RHBDF1Q96CC6 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RHBDF1Q96CC6 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
RHBDF1Q96CC6 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RHBDF1Q96CC6 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.43■□□□□ 0.7
RHBDF1Q96CC6 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.43■□□□□ 0.7
RHBDF1Q96CC6 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RHBDF1Q96CC6 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RHBDF1Q96CC6 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RHBDF1Q96CC6 HLA-G-202ENST00000376815 851 ntBASIC19.43■□□□□ 0.7
RHBDF1Q96CC6 HLA-G-203ENST00000376818 1127 ntBASIC19.43■□□□□ 0.7
RHBDF1Q96CC6 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.43■□□□□ 0.7
RHBDF1Q96CC6 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.43■□□□□ 0.7
RHBDF1Q96CC6 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RHBDF1Q96CC6 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.43■□□□□ 0.7
RHBDF1Q96CC6 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.43■□□□□ 0.7
RHBDF1Q96CC6 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.43■□□□□ 0.7
RHBDF1Q96CC6 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.43■□□□□ 0.7
RHBDF1Q96CC6 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RHBDF1Q96CC6 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RHBDF1Q96CC6 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.43■□□□□ 0.7
RHBDF1Q96CC6 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
RHBDF1Q96CC6 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RHBDF1Q96CC6 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RHBDF1Q96CC6 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
RHBDF1Q96CC6 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.42■□□□□ 0.7
RHBDF1Q96CC6 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RHBDF1Q96CC6 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
RHBDF1Q96CC6 GPX1P1-201ENST00000388829 606 ntBASIC19.42■□□□□ 0.7
RHBDF1Q96CC6 MIPEPP3-201ENST00000412105 444 ntBASIC19.42■□□□□ 0.7
RHBDF1Q96CC6 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
RHBDF1Q96CC6 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.42■□□□□ 0.7
RHBDF1Q96CC6 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.42■□□□□ 0.7
RHBDF1Q96CC6 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.42■□□□□ 0.7
RHBDF1Q96CC6 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.42■□□□□ 0.7
RHBDF1Q96CC6 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RHBDF1Q96CC6 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.42■□□□□ 0.7
RHBDF1Q96CC6 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.42■□□□□ 0.7
RHBDF1Q96CC6 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RHBDF1Q96CC6 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RHBDF1Q96CC6 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RHBDF1Q96CC6 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RHBDF1Q96CC6 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
RHBDF1Q96CC6 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RHBDF1Q96CC6 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RHBDF1Q96CC6 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RHBDF1Q96CC6 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RHBDF1Q96CC6 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.41■□□□□ 0.7
RHBDF1Q96CC6 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms