Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HPS1Q92902 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.15■□□□□ 0.5
HPS1Q92902 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.15■□□□□ 0.5
HPS1Q92902 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.15■□□□□ 0.5
HPS1Q92902 AC137761.2-201ENST00000561729 223 ntBASIC18.15■□□□□ 0.5
HPS1Q92902 AC145350.3-201ENST00000569033 163 ntBASIC18.15■□□□□ 0.5
HPS1Q92902 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.15■□□□□ 0.5
HPS1Q92902 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HPS1Q92902 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.15■□□□□ 0.5
HPS1Q92902 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HPS1Q92902 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
HPS1Q92902 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HPS1Q92902 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
HPS1Q92902 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HPS1Q92902 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HPS1Q92902 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
HPS1Q92902 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
HPS1Q92902 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.15■□□□□ 0.5
HPS1Q92902 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
HPS1Q92902 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
HPS1Q92902 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
HPS1Q92902 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.14■□□□□ 0.5
HPS1Q92902 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.14■□□□□ 0.5
HPS1Q92902 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
HPS1Q92902 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
HPS1Q92902 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.14■□□□□ 0.49
HPS1Q92902 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HPS1Q92902 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
HPS1Q92902 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HPS1Q92902 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HPS1Q92902 KRT19P1-201ENST00000405746 1186 ntBASIC18.14■□□□□ 0.49
HPS1Q92902 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HPS1Q92902 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.14■□□□□ 0.49
HPS1Q92902 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.14■□□□□ 0.49
HPS1Q92902 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HPS1Q92902 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
HPS1Q92902 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.14■□□□□ 0.49
HPS1Q92902 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
HPS1Q92902 AL049812.1-201ENST00000432563 2267 ntBASIC18.14■□□□□ 0.49
HPS1Q92902 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HPS1Q92902 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HPS1Q92902 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HPS1Q92902 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HPS1Q92902 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
HPS1Q92902 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
HPS1Q92902 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HPS1Q92902 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.13■□□□□ 0.49
HPS1Q92902 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.13■□□□□ 0.49
HPS1Q92902 AC027702.1-201ENST00000563810 1770 ntBASIC18.13■□□□□ 0.49
HPS1Q92902 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
HPS1Q92902 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
HPS1Q92902 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.13■□□□□ 0.49
HPS1Q92902 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
HPS1Q92902 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.13■□□□□ 0.49
HPS1Q92902 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.13■□□□□ 0.49
HPS1Q92902 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HPS1Q92902 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
HPS1Q92902 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HPS1Q92902 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
HPS1Q92902 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HPS1Q92902 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HPS1Q92902 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
HPS1Q92902 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
HPS1Q92902 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HPS1Q92902 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HPS1Q92902 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HPS1Q92902 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.13■□□□□ 0.49
HPS1Q92902 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.13■□□□□ 0.49
HPS1Q92902 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
HPS1Q92902 AC006128.1-201ENST00000624704 1661 ntBASIC18.12■□□□□ 0.49
HPS1Q92902 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.12■□□□□ 0.49
HPS1Q92902 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HPS1Q92902 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HPS1Q92902 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HPS1Q92902 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
HPS1Q92902 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.12■□□□□ 0.49
HPS1Q92902 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HPS1Q92902 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HPS1Q92902 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.12■□□□□ 0.49
HPS1Q92902 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HPS1Q92902 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.12■□□□□ 0.49
HPS1Q92902 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HPS1Q92902 AC080038.1-201ENST00000611274 1154 ntBASIC18.12■□□□□ 0.49
HPS1Q92902 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
HPS1Q92902 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HPS1Q92902 AC093503.3-201ENST00000624917 2352 ntBASIC18.12■□□□□ 0.49
HPS1Q92902 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
HPS1Q92902 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
HPS1Q92902 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
HPS1Q92902 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.11■□□□□ 0.49
HPS1Q92902 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HPS1Q92902 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HPS1Q92902 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HPS1Q92902 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HPS1Q92902 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
HPS1Q92902 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HPS1Q92902 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.11■□□□□ 0.49
HPS1Q92902 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
HPS1Q92902 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
HPS1Q92902 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms