Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RTN4IP1Q8WWV3 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTN4IP1Q8WWV3 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTN4IP1Q8WWV3 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC16.78■□□□□ 0.28
RTN4IP1Q8WWV3 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.78■□□□□ 0.28
RTN4IP1Q8WWV3 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RTN4IP1Q8WWV3 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC16.78■□□□□ 0.28
RTN4IP1Q8WWV3 RBM17P2-201ENST00000616397 1405 ntBASIC16.78■□□□□ 0.28
RTN4IP1Q8WWV3 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC16.78■□□□□ 0.28
RTN4IP1Q8WWV3 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RTN4IP1Q8WWV3 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
RTN4IP1Q8WWV3 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
RTN4IP1Q8WWV3 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
RTN4IP1Q8WWV3 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.77■□□□□ 0.28
RTN4IP1Q8WWV3 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RTN4IP1Q8WWV3 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.77■□□□□ 0.28
RTN4IP1Q8WWV3 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
RTN4IP1Q8WWV3 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RTN4IP1Q8WWV3 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RTN4IP1Q8WWV3 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RTN4IP1Q8WWV3 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RTN4IP1Q8WWV3 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
RTN4IP1Q8WWV3 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC16.77■□□□□ 0.28
RTN4IP1Q8WWV3 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC16.77■□□□□ 0.28
RTN4IP1Q8WWV3 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
RTN4IP1Q8WWV3 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC16.77■□□□□ 0.28
RTN4IP1Q8WWV3 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RTN4IP1Q8WWV3 AC243732.1-201ENST00000612648 864 ntBASIC16.77■□□□□ 0.28
RTN4IP1Q8WWV3 MIR2861-201ENST00000636310 90 ntBASIC16.77■□□□□ 0.28
RTN4IP1Q8WWV3 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
RTN4IP1Q8WWV3 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RTN4IP1Q8WWV3 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.28
RTN4IP1Q8WWV3 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RTN4IP1Q8WWV3 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
RTN4IP1Q8WWV3 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RTN4IP1Q8WWV3 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.77■□□□□ 0.27
RTN4IP1Q8WWV3 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.27
RTN4IP1Q8WWV3 AP000974.1-201ENST00000623909 2387 ntBASIC16.77■□□□□ 0.27
RTN4IP1Q8WWV3 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC16.77■□□□□ 0.27
RTN4IP1Q8WWV3 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
RTN4IP1Q8WWV3 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC16.77■□□□□ 0.27
RTN4IP1Q8WWV3 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RTN4IP1Q8WWV3 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTN4IP1Q8WWV3 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTN4IP1Q8WWV3 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTN4IP1Q8WWV3 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTN4IP1Q8WWV3 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTN4IP1Q8WWV3 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
RTN4IP1Q8WWV3 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTN4IP1Q8WWV3 HSCB-202ENST00000398941 955 ntTSL 2 BASIC16.76■□□□□ 0.27
RTN4IP1Q8WWV3 AC016769.1-201ENST00000409132 1010 ntBASIC16.76■□□□□ 0.27
RTN4IP1Q8WWV3 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC16.76■□□□□ 0.27
RTN4IP1Q8WWV3 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC16.76■□□□□ 0.27
RTN4IP1Q8WWV3 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
RTN4IP1Q8WWV3 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC16.76■□□□□ 0.27
RTN4IP1Q8WWV3 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC16.76■□□□□ 0.27
RTN4IP1Q8WWV3 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
RTN4IP1Q8WWV3 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
RTN4IP1Q8WWV3 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTN4IP1Q8WWV3 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.76■□□□□ 0.27
RTN4IP1Q8WWV3 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
RTN4IP1Q8WWV3 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.76■□□□□ 0.27
RTN4IP1Q8WWV3 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTN4IP1Q8WWV3 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTN4IP1Q8WWV3 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC16.76■□□□□ 0.27
RTN4IP1Q8WWV3 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RTN4IP1Q8WWV3 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
RTN4IP1Q8WWV3 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RTN4IP1Q8WWV3 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTN4IP1Q8WWV3 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTN4IP1Q8WWV3 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTN4IP1Q8WWV3 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
RTN4IP1Q8WWV3 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC16.75■□□□□ 0.27
RTN4IP1Q8WWV3 PTPA-214ENST00000423100 988 ntTSL 2 BASIC16.75■□□□□ 0.27
RTN4IP1Q8WWV3 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RTN4IP1Q8WWV3 SPI1-203ENST00000533030 661 ntTSL 2 BASIC16.75■□□□□ 0.27
RTN4IP1Q8WWV3 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC16.75■□□□□ 0.27
RTN4IP1Q8WWV3 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTN4IP1Q8WWV3 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTN4IP1Q8WWV3 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTN4IP1Q8WWV3 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTN4IP1Q8WWV3 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC16.75■□□□□ 0.27
RTN4IP1Q8WWV3 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTN4IP1Q8WWV3 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RTN4IP1Q8WWV3 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTN4IP1Q8WWV3 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RTN4IP1Q8WWV3 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTN4IP1Q8WWV3 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
RTN4IP1Q8WWV3 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC16.75■□□□□ 0.27
RTN4IP1Q8WWV3 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RTN4IP1Q8WWV3 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTN4IP1Q8WWV3 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RTN4IP1Q8WWV3 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTN4IP1Q8WWV3 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTN4IP1Q8WWV3 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.74■□□□□ 0.27
RTN4IP1Q8WWV3 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTN4IP1Q8WWV3 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
RTN4IP1Q8WWV3 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RTN4IP1Q8WWV3 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RTN4IP1Q8WWV3 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms