Protein–RNA interactions for Protein: Q8WWH5

TRUB1, Probable tRNA pseudouridine synthase 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1Q8WWH5 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRUB1Q8WWH5 AL136162.1-201ENST00000607711 1078 ntBASIC18.28■□□□□ 0.52
TRUB1Q8WWH5 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRUB1Q8WWH5 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
TRUB1Q8WWH5 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRUB1Q8WWH5 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.28■□□□□ 0.52
TRUB1Q8WWH5 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.28■□□□□ 0.52
TRUB1Q8WWH5 AL138781.2-201ENST00000617896 1843 ntBASIC18.28■□□□□ 0.52
TRUB1Q8WWH5 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
TRUB1Q8WWH5 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
TRUB1Q8WWH5 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.27■□□□□ 0.52
TRUB1Q8WWH5 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRUB1Q8WWH5 AC135279.3-201ENST00000610945 1311 ntBASIC18.27■□□□□ 0.52
TRUB1Q8WWH5 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRUB1Q8WWH5 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRUB1Q8WWH5 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRUB1Q8WWH5 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRUB1Q8WWH5 KRT8P36-201ENST00000489121 1440 ntBASIC18.27■□□□□ 0.52
TRUB1Q8WWH5 AL136116.3-201ENST00000402907 1138 ntBASIC18.27■□□□□ 0.52
TRUB1Q8WWH5 AC099791.1-201ENST00000416440 715 ntBASIC18.27■□□□□ 0.52
TRUB1Q8WWH5 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.27■□□□□ 0.52
TRUB1Q8WWH5 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.27■□□□□ 0.52
TRUB1Q8WWH5 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.27■□□□□ 0.52
TRUB1Q8WWH5 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.27■□□□□ 0.52
TRUB1Q8WWH5 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRUB1Q8WWH5 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
TRUB1Q8WWH5 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
TRUB1Q8WWH5 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.27■□□□□ 0.52
TRUB1Q8WWH5 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.27■□□□□ 0.51
TRUB1Q8WWH5 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.27■□□□□ 0.51
TRUB1Q8WWH5 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TRUB1Q8WWH5 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.27■□□□□ 0.51
TRUB1Q8WWH5 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRUB1Q8WWH5 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRUB1Q8WWH5 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.26■□□□□ 0.51
TRUB1Q8WWH5 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRUB1Q8WWH5 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
TRUB1Q8WWH5 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRUB1Q8WWH5 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRUB1Q8WWH5 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRUB1Q8WWH5 BX119927.1-201ENST00000636596 1552 ntBASIC18.26■□□□□ 0.51
TRUB1Q8WWH5 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.26■□□□□ 0.51
TRUB1Q8WWH5 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.26■□□□□ 0.51
TRUB1Q8WWH5 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRUB1Q8WWH5 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRUB1Q8WWH5 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TRUB1Q8WWH5 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.26■□□□□ 0.51
TRUB1Q8WWH5 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.26■□□□□ 0.51
TRUB1Q8WWH5 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.26■□□□□ 0.51
TRUB1Q8WWH5 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.26■□□□□ 0.51
TRUB1Q8WWH5 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TRUB1Q8WWH5 AC012414.1-201ENST00000556676 535 ntBASIC18.26■□□□□ 0.51
TRUB1Q8WWH5 AC027682.1-201ENST00000562846 899 ntBASIC18.26■□□□□ 0.51
TRUB1Q8WWH5 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.26■□□□□ 0.51
TRUB1Q8WWH5 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TRUB1Q8WWH5 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRUB1Q8WWH5 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRUB1Q8WWH5 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRUB1Q8WWH5 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TRUB1Q8WWH5 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRUB1Q8WWH5 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TRUB1Q8WWH5 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRUB1Q8WWH5 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.26■□□□□ 0.51
TRUB1Q8WWH5 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRUB1Q8WWH5 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
TRUB1Q8WWH5 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRUB1Q8WWH5 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRUB1Q8WWH5 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TRUB1Q8WWH5 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRUB1Q8WWH5 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRUB1Q8WWH5 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRUB1Q8WWH5 DPP3P2-201ENST00000416030 1696 ntBASIC18.25■□□□□ 0.51
TRUB1Q8WWH5 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TRUB1Q8WWH5 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRUB1Q8WWH5 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRUB1Q8WWH5 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRUB1Q8WWH5 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TRUB1Q8WWH5 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRUB1Q8WWH5 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TRUB1Q8WWH5 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRUB1Q8WWH5 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.25■□□□□ 0.51
TRUB1Q8WWH5 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.25■□□□□ 0.51
TRUB1Q8WWH5 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.25■□□□□ 0.51
TRUB1Q8WWH5 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.25■□□□□ 0.51
TRUB1Q8WWH5 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRUB1Q8WWH5 AC138907.5-202ENST00000569484 235 ntBASIC18.25■□□□□ 0.51
TRUB1Q8WWH5 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRUB1Q8WWH5 AC093484.2-201ENST00000580996 2166 ntBASIC18.25■□□□□ 0.51
TRUB1Q8WWH5 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRUB1Q8WWH5 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.25■□□□□ 0.51
TRUB1Q8WWH5 TREX1-205ENST00000625293 1783 ntBASIC18.25■□□□□ 0.51
TRUB1Q8WWH5 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRUB1Q8WWH5 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRUB1Q8WWH5 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TRUB1Q8WWH5 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRUB1Q8WWH5 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRUB1Q8WWH5 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRUB1Q8WWH5 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.24■□□□□ 0.51
TRUB1Q8WWH5 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
TRUB1Q8WWH5 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms