Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
U2AF1L4Q8WU68 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
U2AF1L4Q8WU68 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
U2AF1L4Q8WU68 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
U2AF1L4Q8WU68 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
U2AF1L4Q8WU68 FDX2-207ENST00000494368 584 ntTSL 4 BASIC22.88■■□□□ 1.25
U2AF1L4Q8WU68 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC22.88■■□□□ 1.25
U2AF1L4Q8WU68 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC22.88■■□□□ 1.25
U2AF1L4Q8WU68 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
U2AF1L4Q8WU68 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
U2AF1L4Q8WU68 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
U2AF1L4Q8WU68 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
U2AF1L4Q8WU68 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
U2AF1L4Q8WU68 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
U2AF1L4Q8WU68 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC22.88■■□□□ 1.25
U2AF1L4Q8WU68 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC22.88■■□□□ 1.25
U2AF1L4Q8WU68 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
U2AF1L4Q8WU68 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
U2AF1L4Q8WU68 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC22.87■■□□□ 1.25
U2AF1L4Q8WU68 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
U2AF1L4Q8WU68 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
U2AF1L4Q8WU68 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
U2AF1L4Q8WU68 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
U2AF1L4Q8WU68 CYP2D8P-201ENST00000433633 1490 ntBASIC22.87■■□□□ 1.25
U2AF1L4Q8WU68 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
U2AF1L4Q8WU68 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
U2AF1L4Q8WU68 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC22.87■■□□□ 1.25
U2AF1L4Q8WU68 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
U2AF1L4Q8WU68 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC22.87■■□□□ 1.25
U2AF1L4Q8WU68 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC22.87■■□□□ 1.25
U2AF1L4Q8WU68 STX5-203ENST00000394690 1568 ntTSL 5 BASIC22.87■■□□□ 1.25
U2AF1L4Q8WU68 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
U2AF1L4Q8WU68 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
U2AF1L4Q8WU68 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC22.87■■□□□ 1.25
U2AF1L4Q8WU68 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
U2AF1L4Q8WU68 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC22.86■■□□□ 1.25
U2AF1L4Q8WU68 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
U2AF1L4Q8WU68 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
U2AF1L4Q8WU68 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
U2AF1L4Q8WU68 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC22.86■■□□□ 1.25
U2AF1L4Q8WU68 SLC25A3P1-201ENST00000443844 931 ntBASIC22.86■■□□□ 1.25
U2AF1L4Q8WU68 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC22.86■■□□□ 1.25
U2AF1L4Q8WU68 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC22.86■■□□□ 1.25
U2AF1L4Q8WU68 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
U2AF1L4Q8WU68 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC22.86■■□□□ 1.25
U2AF1L4Q8WU68 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC22.86■■□□□ 1.25
U2AF1L4Q8WU68 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC22.86■■□□□ 1.25
U2AF1L4Q8WU68 AL121829.2-201ENST00000620908 328 ntBASIC22.86■■□□□ 1.25
U2AF1L4Q8WU68 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
U2AF1L4Q8WU68 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
U2AF1L4Q8WU68 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
U2AF1L4Q8WU68 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
U2AF1L4Q8WU68 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
U2AF1L4Q8WU68 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC22.85■■□□□ 1.25
U2AF1L4Q8WU68 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
U2AF1L4Q8WU68 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
U2AF1L4Q8WU68 PGM5P4-201ENST00000421970 445 ntBASIC22.85■■□□□ 1.25
U2AF1L4Q8WU68 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
U2AF1L4Q8WU68 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
U2AF1L4Q8WU68 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC22.85■■□□□ 1.25
U2AF1L4Q8WU68 NBPF21P-201ENST00000425093 1451 ntBASIC22.85■■□□□ 1.25
U2AF1L4Q8WU68 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC22.85■■□□□ 1.25
U2AF1L4Q8WU68 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
U2AF1L4Q8WU68 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC22.84■■□□□ 1.25
U2AF1L4Q8WU68 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
U2AF1L4Q8WU68 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
U2AF1L4Q8WU68 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
U2AF1L4Q8WU68 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
U2AF1L4Q8WU68 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
U2AF1L4Q8WU68 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC22.84■■□□□ 1.25
U2AF1L4Q8WU68 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
U2AF1L4Q8WU68 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
U2AF1L4Q8WU68 AL390955.1-201ENST00000428694 934 ntBASIC22.84■■□□□ 1.25
U2AF1L4Q8WU68 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC22.84■■□□□ 1.25
U2AF1L4Q8WU68 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC22.84■■□□□ 1.25
U2AF1L4Q8WU68 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC22.84■■□□□ 1.25
U2AF1L4Q8WU68 TMA16-209ENST00000513272 803 ntTSL 2 BASIC22.84■■□□□ 1.25
U2AF1L4Q8WU68 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC22.84■■□□□ 1.25
U2AF1L4Q8WU68 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
U2AF1L4Q8WU68 AC010947.1-201ENST00000623454 693 ntBASIC22.84■■□□□ 1.25
U2AF1L4Q8WU68 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC22.84■■□□□ 1.25
U2AF1L4Q8WU68 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
U2AF1L4Q8WU68 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
U2AF1L4Q8WU68 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC22.84■■□□□ 1.25
U2AF1L4Q8WU68 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC22.83■■□□□ 1.25
U2AF1L4Q8WU68 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC22.83■■□□□ 1.25
U2AF1L4Q8WU68 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC22.83■■□□□ 1.25
U2AF1L4Q8WU68 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC22.83■■□□□ 1.25
U2AF1L4Q8WU68 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC22.83■■□□□ 1.25
U2AF1L4Q8WU68 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC22.83■■□□□ 1.25
U2AF1L4Q8WU68 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC22.83■■□□□ 1.25
U2AF1L4Q8WU68 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
U2AF1L4Q8WU68 AF106564.1-201ENST00000607058 2553 ntBASIC22.83■■□□□ 1.25
U2AF1L4Q8WU68 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
U2AF1L4Q8WU68 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC22.83■■□□□ 1.25
U2AF1L4Q8WU68 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC22.83■■□□□ 1.25
U2AF1L4Q8WU68 WWOX-216ENST00000569818 525 ntBASIC22.83■■□□□ 1.25
U2AF1L4Q8WU68 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
U2AF1L4Q8WU68 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.25
U2AF1L4Q8WU68 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms