Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
SMARCC2Q8TAQ2 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC23.43■■□□□ 1.34
SMARCC2Q8TAQ2 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC23.43■■□□□ 1.34
SMARCC2Q8TAQ2 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
SMARCC2Q8TAQ2 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
SMARCC2Q8TAQ2 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
SMARCC2Q8TAQ2 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
SMARCC2Q8TAQ2 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC23.42■■□□□ 1.34
SMARCC2Q8TAQ2 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
SMARCC2Q8TAQ2 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC23.42■■□□□ 1.34
SMARCC2Q8TAQ2 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC23.42■■□□□ 1.34
SMARCC2Q8TAQ2 RNA5SP413-201ENST00000516373 109 ntBASIC23.42■■□□□ 1.34
SMARCC2Q8TAQ2 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC23.42■■□□□ 1.34
SMARCC2Q8TAQ2 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC23.42■■□□□ 1.34
SMARCC2Q8TAQ2 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
SMARCC2Q8TAQ2 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
SMARCC2Q8TAQ2 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC23.42■■□□□ 1.34
SMARCC2Q8TAQ2 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
SMARCC2Q8TAQ2 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
SMARCC2Q8TAQ2 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
SMARCC2Q8TAQ2 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
SMARCC2Q8TAQ2 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
SMARCC2Q8TAQ2 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
SMARCC2Q8TAQ2 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
SMARCC2Q8TAQ2 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
SMARCC2Q8TAQ2 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC23.41■■□□□ 1.34
SMARCC2Q8TAQ2 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
SMARCC2Q8TAQ2 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC23.41■■□□□ 1.34
SMARCC2Q8TAQ2 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC23.41■■□□□ 1.34
SMARCC2Q8TAQ2 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
SMARCC2Q8TAQ2 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
SMARCC2Q8TAQ2 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
SMARCC2Q8TAQ2 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
SMARCC2Q8TAQ2 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
SMARCC2Q8TAQ2 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
SMARCC2Q8TAQ2 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC23.41■■□□□ 1.34
SMARCC2Q8TAQ2 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
SMARCC2Q8TAQ2 CD37-204ENST00000535669 1674 ntTSL 2 BASIC23.41■■□□□ 1.34
SMARCC2Q8TAQ2 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
SMARCC2Q8TAQ2 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
SMARCC2Q8TAQ2 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
SMARCC2Q8TAQ2 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
SMARCC2Q8TAQ2 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
SMARCC2Q8TAQ2 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
SMARCC2Q8TAQ2 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
SMARCC2Q8TAQ2 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
SMARCC2Q8TAQ2 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
SMARCC2Q8TAQ2 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC23.4■■□□□ 1.34
SMARCC2Q8TAQ2 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC23.4■■□□□ 1.34
SMARCC2Q8TAQ2 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC23.4■■□□□ 1.34
SMARCC2Q8TAQ2 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC23.4■■□□□ 1.34
SMARCC2Q8TAQ2 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC23.4■■□□□ 1.34
SMARCC2Q8TAQ2 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC23.4■■□□□ 1.34
SMARCC2Q8TAQ2 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC23.4■■□□□ 1.34
SMARCC2Q8TAQ2 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC23.4■■□□□ 1.34
SMARCC2Q8TAQ2 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC23.4■■□□□ 1.34
SMARCC2Q8TAQ2 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
SMARCC2Q8TAQ2 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
SMARCC2Q8TAQ2 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC23.4■■□□□ 1.34
SMARCC2Q8TAQ2 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
SMARCC2Q8TAQ2 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC23.4■■□□□ 1.34
SMARCC2Q8TAQ2 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC23.4■■□□□ 1.34
SMARCC2Q8TAQ2 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
SMARCC2Q8TAQ2 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
SMARCC2Q8TAQ2 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
SMARCC2Q8TAQ2 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC23.39■■□□□ 1.33
SMARCC2Q8TAQ2 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC23.39■■□□□ 1.33
SMARCC2Q8TAQ2 NME6-213ENST00000451657 871 ntTSL 2 BASIC23.39■■□□□ 1.33
SMARCC2Q8TAQ2 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC23.39■■□□□ 1.33
SMARCC2Q8TAQ2 HES2-205ENST00000487437 968 ntTSL 3 BASIC23.39■■□□□ 1.33
SMARCC2Q8TAQ2 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
SMARCC2Q8TAQ2 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
SMARCC2Q8TAQ2 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
SMARCC2Q8TAQ2 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC23.39■■□□□ 1.33
SMARCC2Q8TAQ2 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC23.39■■□□□ 1.33
SMARCC2Q8TAQ2 TBCB-214ENST00000629269 413 ntTSL 5 BASIC23.39■■□□□ 1.33
SMARCC2Q8TAQ2 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
SMARCC2Q8TAQ2 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
SMARCC2Q8TAQ2 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SMARCC2Q8TAQ2 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SMARCC2Q8TAQ2 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC23.38■■□□□ 1.33
SMARCC2Q8TAQ2 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
SMARCC2Q8TAQ2 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SMARCC2Q8TAQ2 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SMARCC2Q8TAQ2 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
SMARCC2Q8TAQ2 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
SMARCC2Q8TAQ2 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC23.38■■□□□ 1.33
SMARCC2Q8TAQ2 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SMARCC2Q8TAQ2 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC23.38■■□□□ 1.33
SMARCC2Q8TAQ2 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
SMARCC2Q8TAQ2 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SMARCC2Q8TAQ2 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
SMARCC2Q8TAQ2 NXN-202ENST00000537628 1340 ntTSL 3 BASIC23.37■■□□□ 1.33
SMARCC2Q8TAQ2 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SMARCC2Q8TAQ2 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SMARCC2Q8TAQ2 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
SMARCC2Q8TAQ2 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SMARCC2Q8TAQ2 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
SMARCC2Q8TAQ2 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SMARCC2Q8TAQ2 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC23.37■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms