Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NUP43Q8NFH3 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NUP43Q8NFH3 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NUP43Q8NFH3 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NUP43Q8NFH3 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NUP43Q8NFH3 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NUP43Q8NFH3 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NUP43Q8NFH3 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.7■□□□□ 0.58
NUP43Q8NFH3 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.7■□□□□ 0.58
NUP43Q8NFH3 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NUP43Q8NFH3 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.7■□□□□ 0.58
NUP43Q8NFH3 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.7■□□□□ 0.58
NUP43Q8NFH3 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.7■□□□□ 0.58
NUP43Q8NFH3 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
NUP43Q8NFH3 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.7■□□□□ 0.58
NUP43Q8NFH3 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
NUP43Q8NFH3 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NUP43Q8NFH3 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.7■□□□□ 0.58
NUP43Q8NFH3 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
NUP43Q8NFH3 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.7■□□□□ 0.58
NUP43Q8NFH3 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NUP43Q8NFH3 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.69■□□□□ 0.58
NUP43Q8NFH3 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NUP43Q8NFH3 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.69■□□□□ 0.58
NUP43Q8NFH3 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.69■□□□□ 0.58
NUP43Q8NFH3 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
NUP43Q8NFH3 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.69■□□□□ 0.58
NUP43Q8NFH3 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
NUP43Q8NFH3 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
NUP43Q8NFH3 AC083906.2-201ENST00000511578 360 ntBASIC18.69■□□□□ 0.58
NUP43Q8NFH3 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.69■□□□□ 0.58
NUP43Q8NFH3 AC092666.2-201ENST00000613287 246 ntBASIC18.69■□□□□ 0.58
NUP43Q8NFH3 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NUP43Q8NFH3 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
NUP43Q8NFH3 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NUP43Q8NFH3 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
NUP43Q8NFH3 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NUP43Q8NFH3 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
NUP43Q8NFH3 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NUP43Q8NFH3 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NUP43Q8NFH3 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NUP43Q8NFH3 KRT16P6-202ENST00000425692 1426 ntBASIC18.68■□□□□ 0.58
NUP43Q8NFH3 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.68■□□□□ 0.58
NUP43Q8NFH3 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NUP43Q8NFH3 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
NUP43Q8NFH3 HLA-G-202ENST00000376815 851 ntBASIC18.68■□□□□ 0.58
NUP43Q8NFH3 HLA-G-203ENST00000376818 1127 ntBASIC18.68■□□□□ 0.58
NUP43Q8NFH3 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.68■□□□□ 0.58
NUP43Q8NFH3 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.68■□□□□ 0.58
NUP43Q8NFH3 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.68■□□□□ 0.58
NUP43Q8NFH3 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NUP43Q8NFH3 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.68■□□□□ 0.58
NUP43Q8NFH3 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.68■□□□□ 0.58
NUP43Q8NFH3 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.68■□□□□ 0.58
NUP43Q8NFH3 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
NUP43Q8NFH3 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NUP43Q8NFH3 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.68■□□□□ 0.58
NUP43Q8NFH3 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
NUP43Q8NFH3 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
NUP43Q8NFH3 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NUP43Q8NFH3 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
NUP43Q8NFH3 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NUP43Q8NFH3 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NUP43Q8NFH3 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NUP43Q8NFH3 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NUP43Q8NFH3 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.67■□□□□ 0.58
NUP43Q8NFH3 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NUP43Q8NFH3 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.67■□□□□ 0.58
NUP43Q8NFH3 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
NUP43Q8NFH3 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NUP43Q8NFH3 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NUP43Q8NFH3 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NUP43Q8NFH3 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NUP43Q8NFH3 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NUP43Q8NFH3 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NUP43Q8NFH3 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NUP43Q8NFH3 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
NUP43Q8NFH3 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.67■□□□□ 0.58
NUP43Q8NFH3 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.67■□□□□ 0.58
NUP43Q8NFH3 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.67■□□□□ 0.58
NUP43Q8NFH3 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NUP43Q8NFH3 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NUP43Q8NFH3 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NUP43Q8NFH3 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.66■□□□□ 0.58
NUP43Q8NFH3 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NUP43Q8NFH3 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
NUP43Q8NFH3 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.66■□□□□ 0.58
NUP43Q8NFH3 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NUP43Q8NFH3 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
NUP43Q8NFH3 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
NUP43Q8NFH3 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NUP43Q8NFH3 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NUP43Q8NFH3 MIPEPP3-201ENST00000412105 444 ntBASIC18.66■□□□□ 0.58
NUP43Q8NFH3 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NUP43Q8NFH3 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.66■□□□□ 0.58
NUP43Q8NFH3 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
NUP43Q8NFH3 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.66■□□□□ 0.58
NUP43Q8NFH3 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.66■□□□□ 0.58
NUP43Q8NFH3 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
NUP43Q8NFH3 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms