Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DNAAF1Q8NEP3 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.54■□□□□ 0.4
DNAAF1Q8NEP3 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DNAAF1Q8NEP3 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.53■□□□□ 0.4
DNAAF1Q8NEP3 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.53■□□□□ 0.4
DNAAF1Q8NEP3 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
DNAAF1Q8NEP3 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
DNAAF1Q8NEP3 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.53■□□□□ 0.4
DNAAF1Q8NEP3 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
DNAAF1Q8NEP3 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DNAAF1Q8NEP3 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.53■□□□□ 0.4
DNAAF1Q8NEP3 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
DNAAF1Q8NEP3 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DNAAF1Q8NEP3 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.53■□□□□ 0.4
DNAAF1Q8NEP3 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
DNAAF1Q8NEP3 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.53■□□□□ 0.4
DNAAF1Q8NEP3 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DNAAF1Q8NEP3 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.53■□□□□ 0.4
DNAAF1Q8NEP3 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.53■□□□□ 0.4
DNAAF1Q8NEP3 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
DNAAF1Q8NEP3 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
DNAAF1Q8NEP3 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
DNAAF1Q8NEP3 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
DNAAF1Q8NEP3 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
DNAAF1Q8NEP3 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
DNAAF1Q8NEP3 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
DNAAF1Q8NEP3 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
DNAAF1Q8NEP3 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.4
DNAAF1Q8NEP3 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
DNAAF1Q8NEP3 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
DNAAF1Q8NEP3 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC17.52■□□□□ 0.4
DNAAF1Q8NEP3 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
DNAAF1Q8NEP3 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17.52■□□□□ 0.4
DNAAF1Q8NEP3 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.52■□□□□ 0.4
DNAAF1Q8NEP3 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.52■□□□□ 0.4
DNAAF1Q8NEP3 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.52■□□□□ 0.4
DNAAF1Q8NEP3 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
DNAAF1Q8NEP3 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
DNAAF1Q8NEP3 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
DNAAF1Q8NEP3 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
DNAAF1Q8NEP3 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
DNAAF1Q8NEP3 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
DNAAF1Q8NEP3 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
DNAAF1Q8NEP3 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
DNAAF1Q8NEP3 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DNAAF1Q8NEP3 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
DNAAF1Q8NEP3 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.51■□□□□ 0.39
DNAAF1Q8NEP3 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DNAAF1Q8NEP3 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DNAAF1Q8NEP3 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
DNAAF1Q8NEP3 KRT19P1-201ENST00000405746 1186 ntBASIC17.51■□□□□ 0.39
DNAAF1Q8NEP3 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
DNAAF1Q8NEP3 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.51■□□□□ 0.39
DNAAF1Q8NEP3 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
DNAAF1Q8NEP3 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
DNAAF1Q8NEP3 AC004854.2-201ENST00000608450 1441 ntBASIC17.51■□□□□ 0.39
DNAAF1Q8NEP3 RBM17P2-201ENST00000616397 1405 ntBASIC17.51■□□□□ 0.39
DNAAF1Q8NEP3 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DNAAF1Q8NEP3 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DNAAF1Q8NEP3 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
DNAAF1Q8NEP3 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DNAAF1Q8NEP3 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
DNAAF1Q8NEP3 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DNAAF1Q8NEP3 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
DNAAF1Q8NEP3 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
DNAAF1Q8NEP3 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
DNAAF1Q8NEP3 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.5■□□□□ 0.39
DNAAF1Q8NEP3 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.5■□□□□ 0.39
DNAAF1Q8NEP3 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
DNAAF1Q8NEP3 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DNAAF1Q8NEP3 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
DNAAF1Q8NEP3 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DNAAF1Q8NEP3 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC17.5■□□□□ 0.39
DNAAF1Q8NEP3 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
DNAAF1Q8NEP3 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
DNAAF1Q8NEP3 AC091799.1-201ENST00000422823 811 ntBASIC17.5■□□□□ 0.39
DNAAF1Q8NEP3 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC17.5■□□□□ 0.39
DNAAF1Q8NEP3 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.5■□□□□ 0.39
DNAAF1Q8NEP3 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
DNAAF1Q8NEP3 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
DNAAF1Q8NEP3 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.5■□□□□ 0.39
DNAAF1Q8NEP3 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC17.5■□□□□ 0.39
DNAAF1Q8NEP3 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
DNAAF1Q8NEP3 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DNAAF1Q8NEP3 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.5■□□□□ 0.39
DNAAF1Q8NEP3 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DNAAF1Q8NEP3 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
DNAAF1Q8NEP3 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
DNAAF1Q8NEP3 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DNAAF1Q8NEP3 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.5■□□□□ 0.39
DNAAF1Q8NEP3 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DNAAF1Q8NEP3 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
DNAAF1Q8NEP3 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.5■□□□□ 0.39
DNAAF1Q8NEP3 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.49■□□□□ 0.39
DNAAF1Q8NEP3 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
DNAAF1Q8NEP3 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
DNAAF1Q8NEP3 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DNAAF1Q8NEP3 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.49■□□□□ 0.39
DNAAF1Q8NEP3 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DNAAF1Q8NEP3 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms