Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC168Q8NDH2 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.78■□□□□ 0.28
CCDC168Q8NDH2 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC168Q8NDH2 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.78■□□□□ 0.28
CCDC168Q8NDH2 AC139530.3-201ENST00000620344 690 ntBASIC16.78■□□□□ 0.28
CCDC168Q8NDH2 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC168Q8NDH2 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC168Q8NDH2 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC16.78■□□□□ 0.28
CCDC168Q8NDH2 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC168Q8NDH2 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC16.78■□□□□ 0.28
CCDC168Q8NDH2 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC168Q8NDH2 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC168Q8NDH2 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC168Q8NDH2 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.78■□□□□ 0.28
CCDC168Q8NDH2 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.78■□□□□ 0.28
CCDC168Q8NDH2 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC168Q8NDH2 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC168Q8NDH2 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC168Q8NDH2 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC168Q8NDH2 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC168Q8NDH2 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CCDC168Q8NDH2 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC168Q8NDH2 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC168Q8NDH2 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC168Q8NDH2 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC168Q8NDH2 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC168Q8NDH2 TSPY21P-201ENST00000433481 731 ntBASIC16.77■□□□□ 0.28
CCDC168Q8NDH2 TSPY23P-201ENST00000440136 739 ntBASIC16.77■□□□□ 0.28
CCDC168Q8NDH2 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.77■□□□□ 0.28
CCDC168Q8NDH2 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
CCDC168Q8NDH2 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
CCDC168Q8NDH2 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC168Q8NDH2 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC168Q8NDH2 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC168Q8NDH2 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC168Q8NDH2 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.77■□□□□ 0.27
CCDC168Q8NDH2 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.77■□□□□ 0.27
CCDC168Q8NDH2 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC168Q8NDH2 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC168Q8NDH2 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC168Q8NDH2 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC168Q8NDH2 AL671277.2-201ENST00000458060 996 ntBASIC16.77■□□□□ 0.27
CCDC168Q8NDH2 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.77■□□□□ 0.27
CCDC168Q8NDH2 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC168Q8NDH2 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC168Q8NDH2 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC16.77■□□□□ 0.27
CCDC168Q8NDH2 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC168Q8NDH2 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC168Q8NDH2 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.77■□□□□ 0.27
CCDC168Q8NDH2 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC168Q8NDH2 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CCDC168Q8NDH2 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC168Q8NDH2 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC168Q8NDH2 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC168Q8NDH2 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC168Q8NDH2 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC168Q8NDH2 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC168Q8NDH2 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC168Q8NDH2 AC008622.2-201ENST00000617006 1229 ntBASIC16.76■□□□□ 0.27
CCDC168Q8NDH2 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.76■□□□□ 0.27
CCDC168Q8NDH2 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CCDC168Q8NDH2 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC168Q8NDH2 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC168Q8NDH2 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC168Q8NDH2 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC16.76■□□□□ 0.27
CCDC168Q8NDH2 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC168Q8NDH2 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.76■□□□□ 0.27
CCDC168Q8NDH2 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC168Q8NDH2 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
CCDC168Q8NDH2 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.76■□□□□ 0.27
CCDC168Q8NDH2 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC168Q8NDH2 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC168Q8NDH2 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC168Q8NDH2 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC168Q8NDH2 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC168Q8NDH2 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC16.75■□□□□ 0.27
CCDC168Q8NDH2 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.75■□□□□ 0.27
CCDC168Q8NDH2 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.75■□□□□ 0.27
CCDC168Q8NDH2 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC168Q8NDH2 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC168Q8NDH2 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC168Q8NDH2 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC168Q8NDH2 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC168Q8NDH2 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CCDC168Q8NDH2 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC16.75■□□□□ 0.27
CCDC168Q8NDH2 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC168Q8NDH2 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC168Q8NDH2 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC168Q8NDH2 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC168Q8NDH2 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC168Q8NDH2 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.75■□□□□ 0.27
CCDC168Q8NDH2 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC168Q8NDH2 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC168Q8NDH2 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.75■□□□□ 0.27
CCDC168Q8NDH2 KRT17P6-201ENST00000453795 1220 ntBASIC16.75■□□□□ 0.27
CCDC168Q8NDH2 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC168Q8NDH2 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.75■□□□□ 0.27
CCDC168Q8NDH2 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.75■□□□□ 0.27
CCDC168Q8NDH2 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.75■□□□□ 0.27
CCDC168Q8NDH2 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms