Protein–RNA interactions for Protein: Q8NB78

KDM1B, Lysine-specific histone demethylase 1B, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1BQ8NB78 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
KDM1BQ8NB78 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.43■□□□□ 0.86
KDM1BQ8NB78 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.43■□□□□ 0.86
KDM1BQ8NB78 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
KDM1BQ8NB78 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
KDM1BQ8NB78 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.43■□□□□ 0.86
KDM1BQ8NB78 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
KDM1BQ8NB78 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
KDM1BQ8NB78 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.43■□□□□ 0.86
KDM1BQ8NB78 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
KDM1BQ8NB78 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.43■□□□□ 0.86
KDM1BQ8NB78 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.43■□□□□ 0.86
KDM1BQ8NB78 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.43■□□□□ 0.86
KDM1BQ8NB78 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
KDM1BQ8NB78 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
KDM1BQ8NB78 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.43■□□□□ 0.86
KDM1BQ8NB78 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
KDM1BQ8NB78 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.43■□□□□ 0.86
KDM1BQ8NB78 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.43■□□□□ 0.86
KDM1BQ8NB78 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.43■□□□□ 0.86
KDM1BQ8NB78 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
KDM1BQ8NB78 FAM197Y4-202ENST00000622692 608 ntBASIC20.43■□□□□ 0.86
KDM1BQ8NB78 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.43■□□□□ 0.86
KDM1BQ8NB78 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
KDM1BQ8NB78 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.43■□□□□ 0.86
KDM1BQ8NB78 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
KDM1BQ8NB78 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
KDM1BQ8NB78 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KDM1BQ8NB78 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
KDM1BQ8NB78 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.43■□□□□ 0.86
KDM1BQ8NB78 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KDM1BQ8NB78 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KDM1BQ8NB78 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
KDM1BQ8NB78 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KDM1BQ8NB78 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.42■□□□□ 0.86
KDM1BQ8NB78 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
KDM1BQ8NB78 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
KDM1BQ8NB78 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.42■□□□□ 0.86
KDM1BQ8NB78 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
KDM1BQ8NB78 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.42■□□□□ 0.86
KDM1BQ8NB78 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KDM1BQ8NB78 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.42■□□□□ 0.86
KDM1BQ8NB78 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
KDM1BQ8NB78 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.42■□□□□ 0.86
KDM1BQ8NB78 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.42■□□□□ 0.86
KDM1BQ8NB78 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.42■□□□□ 0.86
KDM1BQ8NB78 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.42■□□□□ 0.86
KDM1BQ8NB78 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KDM1BQ8NB78 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KDM1BQ8NB78 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
KDM1BQ8NB78 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
KDM1BQ8NB78 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.42■□□□□ 0.86
KDM1BQ8NB78 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.42■□□□□ 0.86
KDM1BQ8NB78 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KDM1BQ8NB78 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
KDM1BQ8NB78 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KDM1BQ8NB78 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.41■□□□□ 0.86
KDM1BQ8NB78 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
KDM1BQ8NB78 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.41■□□□□ 0.86
KDM1BQ8NB78 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
KDM1BQ8NB78 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
KDM1BQ8NB78 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.41■□□□□ 0.86
KDM1BQ8NB78 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
KDM1BQ8NB78 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.41■□□□□ 0.86
KDM1BQ8NB78 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.41■□□□□ 0.86
KDM1BQ8NB78 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.41■□□□□ 0.86
KDM1BQ8NB78 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
KDM1BQ8NB78 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KDM1BQ8NB78 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.41■□□□□ 0.86
KDM1BQ8NB78 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.41■□□□□ 0.86
KDM1BQ8NB78 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.41■□□□□ 0.86
KDM1BQ8NB78 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.41■□□□□ 0.86
KDM1BQ8NB78 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
KDM1BQ8NB78 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KDM1BQ8NB78 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
KDM1BQ8NB78 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
KDM1BQ8NB78 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
KDM1BQ8NB78 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
KDM1BQ8NB78 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.41■□□□□ 0.86
KDM1BQ8NB78 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KDM1BQ8NB78 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
KDM1BQ8NB78 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KDM1BQ8NB78 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KDM1BQ8NB78 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
KDM1BQ8NB78 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
KDM1BQ8NB78 HLA-G-202ENST00000376815 851 ntBASIC20.4■□□□□ 0.86
KDM1BQ8NB78 HLA-G-203ENST00000376818 1127 ntBASIC20.4■□□□□ 0.86
KDM1BQ8NB78 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KDM1BQ8NB78 RPS2P4-201ENST00000476944 856 ntBASIC20.4■□□□□ 0.86
KDM1BQ8NB78 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.4■□□□□ 0.86
KDM1BQ8NB78 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
KDM1BQ8NB78 AC008550.1-201ENST00000511500 884 ntBASIC20.4■□□□□ 0.86
KDM1BQ8NB78 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
KDM1BQ8NB78 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
KDM1BQ8NB78 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.4■□□□□ 0.86
KDM1BQ8NB78 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
KDM1BQ8NB78 AL121829.2-201ENST00000620908 328 ntBASIC20.4■□□□□ 0.86
KDM1BQ8NB78 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
KDM1BQ8NB78 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.39■□□□□ 0.86
KDM1BQ8NB78 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms