Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.44■□□□□ 0.7
RAB42Q8N4Z0 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.44■□□□□ 0.7
RAB42Q8N4Z0 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.44■□□□□ 0.7
RAB42Q8N4Z0 LINC01521-201ENST00000504184 1943 ntBASIC19.44■□□□□ 0.7
RAB42Q8N4Z0 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RAB42Q8N4Z0 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB42Q8N4Z0 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB42Q8N4Z0 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RAB42Q8N4Z0 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB42Q8N4Z0 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.44■□□□□ 0.7
RAB42Q8N4Z0 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RAB42Q8N4Z0 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.44■□□□□ 0.7
RAB42Q8N4Z0 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB42Q8N4Z0 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB42Q8N4Z0 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB42Q8N4Z0 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB42Q8N4Z0 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
RAB42Q8N4Z0 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.44■□□□□ 0.7
RAB42Q8N4Z0 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB42Q8N4Z0 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.43■□□□□ 0.7
RAB42Q8N4Z0 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB42Q8N4Z0 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB42Q8N4Z0 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB42Q8N4Z0 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB42Q8N4Z0 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.43■□□□□ 0.7
RAB42Q8N4Z0 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.43■□□□□ 0.7
RAB42Q8N4Z0 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.43■□□□□ 0.7
RAB42Q8N4Z0 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.43■□□□□ 0.7
RAB42Q8N4Z0 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RAB42Q8N4Z0 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.43■□□□□ 0.7
RAB42Q8N4Z0 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.43■□□□□ 0.7
RAB42Q8N4Z0 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RAB42Q8N4Z0 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.43■□□□□ 0.7
RAB42Q8N4Z0 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB42Q8N4Z0 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB42Q8N4Z0 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB42Q8N4Z0 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB42Q8N4Z0 PTBP1P-201ENST00000554374 1601 ntBASIC19.43■□□□□ 0.7
RAB42Q8N4Z0 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RAB42Q8N4Z0 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RAB42Q8N4Z0 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
RAB42Q8N4Z0 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB42Q8N4Z0 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB42Q8N4Z0 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB42Q8N4Z0 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.42■□□□□ 0.7
RAB42Q8N4Z0 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
RAB42Q8N4Z0 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
RAB42Q8N4Z0 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB42Q8N4Z0 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB42Q8N4Z0 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RAB42Q8N4Z0 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RAB42Q8N4Z0 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.42■□□□□ 0.7
RAB42Q8N4Z0 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.42■□□□□ 0.7
RAB42Q8N4Z0 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.42■□□□□ 0.7
RAB42Q8N4Z0 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
RAB42Q8N4Z0 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.42■□□□□ 0.7
RAB42Q8N4Z0 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB42Q8N4Z0 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RAB42Q8N4Z0 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RAB42Q8N4Z0 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.42■□□□□ 0.7
RAB42Q8N4Z0 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB42Q8N4Z0 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
RAB42Q8N4Z0 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.42■□□□□ 0.7
RAB42Q8N4Z0 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB42Q8N4Z0 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB42Q8N4Z0 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
RAB42Q8N4Z0 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB42Q8N4Z0 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB42Q8N4Z0 LINC01006-201ENST00000333319 2292 ntBASIC19.41■□□□□ 0.7
RAB42Q8N4Z0 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
RAB42Q8N4Z0 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RAB42Q8N4Z0 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RAB42Q8N4Z0 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB42Q8N4Z0 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB42Q8N4Z0 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RAB42Q8N4Z0 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB42Q8N4Z0 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.41■□□□□ 0.7
RAB42Q8N4Z0 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RAB42Q8N4Z0 CD99P1-205ENST00000527459 561 ntBASIC19.41■□□□□ 0.7
RAB42Q8N4Z0 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RAB42Q8N4Z0 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB42Q8N4Z0 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB42Q8N4Z0 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
RAB42Q8N4Z0 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB42Q8N4Z0 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB42Q8N4Z0 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB42Q8N4Z0 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.41■□□□□ 0.7
RAB42Q8N4Z0 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB42Q8N4Z0 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB42Q8N4Z0 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB42Q8N4Z0 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.4■□□□□ 0.7
RAB42Q8N4Z0 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
RAB42Q8N4Z0 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.4■□□□□ 0.7
RAB42Q8N4Z0 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
RAB42Q8N4Z0 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB42Q8N4Z0 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.4■□□□□ 0.7
RAB42Q8N4Z0 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.4■□□□□ 0.7
RAB42Q8N4Z0 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RAB42Q8N4Z0 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB42Q8N4Z0 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms