Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC116Q8IYX3 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC116Q8IYX3 SLC29A4P1-201ENST00000398760 971 ntBASIC18.84■□□□□ 0.61
CCDC116Q8IYX3 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.84■□□□□ 0.61
CCDC116Q8IYX3 TSPY6P-201ENST00000448518 926 ntBASIC18.84■□□□□ 0.61
CCDC116Q8IYX3 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.84■□□□□ 0.61
CCDC116Q8IYX3 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.84■□□□□ 0.61
CCDC116Q8IYX3 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC116Q8IYX3 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC116Q8IYX3 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC116Q8IYX3 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC116Q8IYX3 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC116Q8IYX3 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC116Q8IYX3 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CCDC116Q8IYX3 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.83■□□□□ 0.61
CCDC116Q8IYX3 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC116Q8IYX3 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.83■□□□□ 0.61
CCDC116Q8IYX3 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC116Q8IYX3 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC116Q8IYX3 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
CCDC116Q8IYX3 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC116Q8IYX3 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
CCDC116Q8IYX3 GUSBP6-202ENST00000438529 1198 ntBASIC18.83■□□□□ 0.6
CCDC116Q8IYX3 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.83■□□□□ 0.6
CCDC116Q8IYX3 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.83■□□□□ 0.6
CCDC116Q8IYX3 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.83■□□□□ 0.6
CCDC116Q8IYX3 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CCDC116Q8IYX3 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.83■□□□□ 0.6
CCDC116Q8IYX3 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
CCDC116Q8IYX3 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC116Q8IYX3 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC116Q8IYX3 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC116Q8IYX3 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC116Q8IYX3 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC116Q8IYX3 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC116Q8IYX3 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC116Q8IYX3 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC116Q8IYX3 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CCDC116Q8IYX3 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.82■□□□□ 0.6
CCDC116Q8IYX3 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC116Q8IYX3 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC116Q8IYX3 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC116Q8IYX3 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC116Q8IYX3 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CCDC116Q8IYX3 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC116Q8IYX3 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC116Q8IYX3 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC116Q8IYX3 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC116Q8IYX3 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC116Q8IYX3 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CCDC116Q8IYX3 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC116Q8IYX3 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC116Q8IYX3 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC116Q8IYX3 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC116Q8IYX3 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC116Q8IYX3 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC116Q8IYX3 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC116Q8IYX3 KRT8P20-201ENST00000423953 1409 ntBASIC18.81■□□□□ 0.6
CCDC116Q8IYX3 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC116Q8IYX3 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC116Q8IYX3 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CCDC116Q8IYX3 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC116Q8IYX3 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC116Q8IYX3 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC116Q8IYX3 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC116Q8IYX3 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC116Q8IYX3 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC116Q8IYX3 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC116Q8IYX3 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC116Q8IYX3 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CCDC116Q8IYX3 DUSP5P2-201ENST00000426873 1033 ntBASIC18.8■□□□□ 0.6
CCDC116Q8IYX3 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC116Q8IYX3 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC116Q8IYX3 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC116Q8IYX3 AL031963.3-201ENST00000606441 850 ntBASIC18.8■□□□□ 0.6
CCDC116Q8IYX3 AL109923.1-201ENST00000618799 583 ntBASIC18.8■□□□□ 0.6
CCDC116Q8IYX3 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC116Q8IYX3 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC116Q8IYX3 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC116Q8IYX3 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC116Q8IYX3 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC116Q8IYX3 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
CCDC116Q8IYX3 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC116Q8IYX3 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC116Q8IYX3 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC116Q8IYX3 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC116Q8IYX3 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC116Q8IYX3 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC116Q8IYX3 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC116Q8IYX3 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CCDC116Q8IYX3 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC116Q8IYX3 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC116Q8IYX3 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC116Q8IYX3 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC116Q8IYX3 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC116Q8IYX3 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CCDC116Q8IYX3 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CCDC116Q8IYX3 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC116Q8IYX3 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC116Q8IYX3 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms