Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
DDX60Q8IY21 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
DDX60Q8IY21 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
DDX60Q8IY21 AL390955.1-201ENST00000428694 934 ntBASIC24.83■■□□□ 1.57
DDX60Q8IY21 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC24.83■■□□□ 1.57
DDX60Q8IY21 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
DDX60Q8IY21 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC24.83■■□□□ 1.57
DDX60Q8IY21 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
DDX60Q8IY21 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC24.83■■□□□ 1.57
DDX60Q8IY21 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
DDX60Q8IY21 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
DDX60Q8IY21 DPP3P2-201ENST00000416030 1696 ntBASIC24.83■■□□□ 1.57
DDX60Q8IY21 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
DDX60Q8IY21 CALM3-202ENST00000391918 702 ntTSL 2 BASIC24.83■■□□□ 1.57
DDX60Q8IY21 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
DDX60Q8IY21 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC24.83■■□□□ 1.57
DDX60Q8IY21 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
DDX60Q8IY21 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
DDX60Q8IY21 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC24.82■■□□□ 1.56
DDX60Q8IY21 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC24.82■■□□□ 1.56
DDX60Q8IY21 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC24.82■■□□□ 1.56
DDX60Q8IY21 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
DDX60Q8IY21 FP700111.2-201ENST00000619190 1892 ntBASIC24.82■■□□□ 1.56
DDX60Q8IY21 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
DDX60Q8IY21 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC24.82■■□□□ 1.56
DDX60Q8IY21 AC004264.1-201ENST00000608354 794 ntBASIC24.82■■□□□ 1.56
DDX60Q8IY21 BID-203ENST00000399765 1879 ntTSL 2 BASIC24.82■■□□□ 1.56
DDX60Q8IY21 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
DDX60Q8IY21 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
DDX60Q8IY21 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
DDX60Q8IY21 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC24.82■■□□□ 1.56
DDX60Q8IY21 KRT8P17-201ENST00000453110 1448 ntBASIC24.81■■□□□ 1.56
DDX60Q8IY21 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC24.81■■□□□ 1.56
DDX60Q8IY21 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC24.81■■□□□ 1.56
DDX60Q8IY21 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC24.81■■□□□ 1.56
DDX60Q8IY21 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC24.81■■□□□ 1.56
DDX60Q8IY21 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC24.81■■□□□ 1.56
DDX60Q8IY21 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
DDX60Q8IY21 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
DDX60Q8IY21 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC24.81■■□□□ 1.56
DDX60Q8IY21 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC24.81■■□□□ 1.56
DDX60Q8IY21 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
DDX60Q8IY21 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC24.81■■□□□ 1.56
DDX60Q8IY21 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC24.81■■□□□ 1.56
DDX60Q8IY21 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
DDX60Q8IY21 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
DDX60Q8IY21 AC073195.1-201ENST00000607241 877 ntBASIC24.81■■□□□ 1.56
DDX60Q8IY21 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
DDX60Q8IY21 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
DDX60Q8IY21 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC24.8■■□□□ 1.56
DDX60Q8IY21 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
DDX60Q8IY21 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
DDX60Q8IY21 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
DDX60Q8IY21 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC24.8■■□□□ 1.56
DDX60Q8IY21 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
DDX60Q8IY21 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
DDX60Q8IY21 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC24.8■■□□□ 1.56
DDX60Q8IY21 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC24.8■■□□□ 1.56
DDX60Q8IY21 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC24.8■■□□□ 1.56
DDX60Q8IY21 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
DDX60Q8IY21 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC24.8■■□□□ 1.56
DDX60Q8IY21 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC24.79■■□□□ 1.56
DDX60Q8IY21 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
DDX60Q8IY21 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC24.79■■□□□ 1.56
DDX60Q8IY21 AC116562.2-201ENST00000507042 360 ntBASIC24.79■■□□□ 1.56
DDX60Q8IY21 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC24.79■■□□□ 1.56
DDX60Q8IY21 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC24.79■■□□□ 1.56
DDX60Q8IY21 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC24.79■■□□□ 1.56
DDX60Q8IY21 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
DDX60Q8IY21 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
DDX60Q8IY21 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
DDX60Q8IY21 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
DDX60Q8IY21 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
DDX60Q8IY21 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
DDX60Q8IY21 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
DDX60Q8IY21 HLA-G-202ENST00000376815 851 ntBASIC24.78■■□□□ 1.56
DDX60Q8IY21 HLA-G-203ENST00000376818 1127 ntBASIC24.78■■□□□ 1.56
DDX60Q8IY21 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
DDX60Q8IY21 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC24.78■■□□□ 1.56
DDX60Q8IY21 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
DDX60Q8IY21 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
DDX60Q8IY21 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC24.78■■□□□ 1.56
DDX60Q8IY21 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
DDX60Q8IY21 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC24.78■■□□□ 1.56
DDX60Q8IY21 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC24.78■■□□□ 1.56
DDX60Q8IY21 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC24.78■■□□□ 1.56
DDX60Q8IY21 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC24.77■■□□□ 1.56
DDX60Q8IY21 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
DDX60Q8IY21 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
DDX60Q8IY21 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC24.77■■□□□ 1.56
DDX60Q8IY21 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC24.77■■□□□ 1.56
DDX60Q8IY21 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC24.77■■□□□ 1.56
DDX60Q8IY21 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
DDX60Q8IY21 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
DDX60Q8IY21 UNC93B2-201ENST00000285383 730 ntBASIC24.77■■□□□ 1.56
DDX60Q8IY21 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
DDX60Q8IY21 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
DDX60Q8IY21 AL355355.2-201ENST00000442321 338 ntBASIC24.77■■□□□ 1.56
DDX60Q8IY21 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC24.77■■□□□ 1.56
DDX60Q8IY21 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC24.77■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms