Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CRLF3Q8IUI8 AC005332.7-201ENST00000614046 2005 ntBASIC19.9■□□□□ 0.78
CRLF3Q8IUI8 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CRLF3Q8IUI8 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
CRLF3Q8IUI8 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
CRLF3Q8IUI8 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CRLF3Q8IUI8 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.89■□□□□ 0.77
CRLF3Q8IUI8 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CRLF3Q8IUI8 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CRLF3Q8IUI8 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CRLF3Q8IUI8 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CRLF3Q8IUI8 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CRLF3Q8IUI8 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
CRLF3Q8IUI8 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.89■□□□□ 0.77
CRLF3Q8IUI8 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.89■□□□□ 0.77
CRLF3Q8IUI8 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.89■□□□□ 0.77
CRLF3Q8IUI8 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.89■□□□□ 0.77
CRLF3Q8IUI8 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.89■□□□□ 0.77
CRLF3Q8IUI8 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.89■□□□□ 0.77
CRLF3Q8IUI8 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CRLF3Q8IUI8 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.88■□□□□ 0.77
CRLF3Q8IUI8 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CRLF3Q8IUI8 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CRLF3Q8IUI8 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CRLF3Q8IUI8 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CRLF3Q8IUI8 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CRLF3Q8IUI8 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.88■□□□□ 0.77
CRLF3Q8IUI8 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CRLF3Q8IUI8 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
CRLF3Q8IUI8 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
CRLF3Q8IUI8 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.88■□□□□ 0.77
CRLF3Q8IUI8 KRT19P1-201ENST00000405746 1186 ntBASIC19.88■□□□□ 0.77
CRLF3Q8IUI8 AC016769.1-201ENST00000409132 1010 ntBASIC19.88■□□□□ 0.77
CRLF3Q8IUI8 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.88■□□□□ 0.77
CRLF3Q8IUI8 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.88■□□□□ 0.77
CRLF3Q8IUI8 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.88■□□□□ 0.77
CRLF3Q8IUI8 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CRLF3Q8IUI8 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.88■□□□□ 0.77
CRLF3Q8IUI8 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.88■□□□□ 0.77
CRLF3Q8IUI8 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CRLF3Q8IUI8 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CRLF3Q8IUI8 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.88■□□□□ 0.77
CRLF3Q8IUI8 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.88■□□□□ 0.77
CRLF3Q8IUI8 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.88■□□□□ 0.77
CRLF3Q8IUI8 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CRLF3Q8IUI8 AC116050.2-201ENST00000612102 1779 ntBASIC19.88■□□□□ 0.77
CRLF3Q8IUI8 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CRLF3Q8IUI8 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CRLF3Q8IUI8 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.87■□□□□ 0.77
CRLF3Q8IUI8 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CRLF3Q8IUI8 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CRLF3Q8IUI8 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CRLF3Q8IUI8 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CRLF3Q8IUI8 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.87■□□□□ 0.77
CRLF3Q8IUI8 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
CRLF3Q8IUI8 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.87■□□□□ 0.77
CRLF3Q8IUI8 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CRLF3Q8IUI8 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CRLF3Q8IUI8 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CRLF3Q8IUI8 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
CRLF3Q8IUI8 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CRLF3Q8IUI8 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.87■□□□□ 0.77
CRLF3Q8IUI8 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CRLF3Q8IUI8 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CRLF3Q8IUI8 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.87■□□□□ 0.77
CRLF3Q8IUI8 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CRLF3Q8IUI8 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.87■□□□□ 0.77
CRLF3Q8IUI8 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CRLF3Q8IUI8 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.87■□□□□ 0.77
CRLF3Q8IUI8 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CRLF3Q8IUI8 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.87■□□□□ 0.77
CRLF3Q8IUI8 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.87■□□□□ 0.77
CRLF3Q8IUI8 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CRLF3Q8IUI8 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CRLF3Q8IUI8 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CRLF3Q8IUI8 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CRLF3Q8IUI8 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.87■□□□□ 0.77
CRLF3Q8IUI8 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CRLF3Q8IUI8 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.87■□□□□ 0.77
CRLF3Q8IUI8 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CRLF3Q8IUI8 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CRLF3Q8IUI8 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CRLF3Q8IUI8 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CRLF3Q8IUI8 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CRLF3Q8IUI8 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.87■□□□□ 0.77
CRLF3Q8IUI8 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CRLF3Q8IUI8 AL691432.2-201ENST00000607222 2038 ntBASIC19.86■□□□□ 0.77
CRLF3Q8IUI8 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CRLF3Q8IUI8 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.86■□□□□ 0.77
CRLF3Q8IUI8 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.86■□□□□ 0.77
CRLF3Q8IUI8 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CRLF3Q8IUI8 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CRLF3Q8IUI8 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CRLF3Q8IUI8 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CRLF3Q8IUI8 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.86■□□□□ 0.77
CRLF3Q8IUI8 AC006015.1-201ENST00000429970 570 ntBASIC19.86■□□□□ 0.77
CRLF3Q8IUI8 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.86■□□□□ 0.77
CRLF3Q8IUI8 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
CRLF3Q8IUI8 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.86■□□□□ 0.77
CRLF3Q8IUI8 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms