Protein–RNA interactions for Protein: Q86Y39

NDUFA11, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA11Q86Y39 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
NDUFA11Q86Y39 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
NDUFA11Q86Y39 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
NDUFA11Q86Y39 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NDUFA11Q86Y39 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC15.51■□□□□ 0.07
NDUFA11Q86Y39 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NDUFA11Q86Y39 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
NDUFA11Q86Y39 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC15.51■□□□□ 0.07
NDUFA11Q86Y39 AC073130.3-201ENST00000624389 2278 ntBASIC15.51■□□□□ 0.07
NDUFA11Q86Y39 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC15.51■□□□□ 0.07
NDUFA11Q86Y39 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NDUFA11Q86Y39 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
NDUFA11Q86Y39 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NDUFA11Q86Y39 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NDUFA11Q86Y39 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NDUFA11Q86Y39 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NDUFA11Q86Y39 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC15.51■□□□□ 0.07
NDUFA11Q86Y39 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC15.51■□□□□ 0.07
NDUFA11Q86Y39 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NDUFA11Q86Y39 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NDUFA11Q86Y39 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NDUFA11Q86Y39 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
NDUFA11Q86Y39 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NDUFA11Q86Y39 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NDUFA11Q86Y39 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NDUFA11Q86Y39 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC15.51■□□□□ 0.07
NDUFA11Q86Y39 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC15.51■□□□□ 0.07
NDUFA11Q86Y39 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC15.51■□□□□ 0.07
NDUFA11Q86Y39 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC15.51■□□□□ 0.07
NDUFA11Q86Y39 AC004264.1-201ENST00000608354 794 ntBASIC15.51■□□□□ 0.07
NDUFA11Q86Y39 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC15.51■□□□□ 0.07
NDUFA11Q86Y39 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NDUFA11Q86Y39 AC092667.1-201ENST00000434301 2586 ntBASIC15.51■□□□□ 0.07
NDUFA11Q86Y39 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NDUFA11Q86Y39 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC15.51■□□□□ 0.07
NDUFA11Q86Y39 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC15.51■□□□□ 0.07
NDUFA11Q86Y39 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NDUFA11Q86Y39 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
NDUFA11Q86Y39 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NDUFA11Q86Y39 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
NDUFA11Q86Y39 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDUFA11Q86Y39 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDUFA11Q86Y39 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC15.5■□□□□ 0.07
NDUFA11Q86Y39 HTR7P1-201ENST00000538670 1336 ntBASIC15.5■□□□□ 0.07
NDUFA11Q86Y39 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
NDUFA11Q86Y39 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDUFA11Q86Y39 Z98882.1-201ENST00000622160 2253 ntBASIC15.5■□□□□ 0.07
NDUFA11Q86Y39 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDUFA11Q86Y39 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC15.5■□□□□ 0.07
NDUFA11Q86Y39 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC15.5■□□□□ 0.07
NDUFA11Q86Y39 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC15.5■□□□□ 0.07
NDUFA11Q86Y39 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NDUFA11Q86Y39 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDUFA11Q86Y39 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDUFA11Q86Y39 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NDUFA11Q86Y39 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
NDUFA11Q86Y39 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDUFA11Q86Y39 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NDUFA11Q86Y39 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC15.5■□□□□ 0.07
NDUFA11Q86Y39 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC15.5■□□□□ 0.07
NDUFA11Q86Y39 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC15.5■□□□□ 0.07
NDUFA11Q86Y39 RPS15-203ENST00000586096 570 ntTSL 2 BASIC15.5■□□□□ 0.07
NDUFA11Q86Y39 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
NDUFA11Q86Y39 Six3os1_6.1-201ENST00000620790 196 ntBASIC15.5■□□□□ 0.07
NDUFA11Q86Y39 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC15.5■□□□□ 0.07
NDUFA11Q86Y39 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDUFA11Q86Y39 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDUFA11Q86Y39 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDUFA11Q86Y39 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDUFA11Q86Y39 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NDUFA11Q86Y39 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDUFA11Q86Y39 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC15.49■□□□□ 0.07
NDUFA11Q86Y39 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
NDUFA11Q86Y39 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC15.49■□□□□ 0.07
NDUFA11Q86Y39 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDUFA11Q86Y39 AC121338.2-201ENST00000622535 1744 ntBASIC15.49■□□□□ 0.07
NDUFA11Q86Y39 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
NDUFA11Q86Y39 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDUFA11Q86Y39 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDUFA11Q86Y39 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
NDUFA11Q86Y39 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDUFA11Q86Y39 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC15.49■□□□□ 0.07
NDUFA11Q86Y39 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NDUFA11Q86Y39 AL355355.2-201ENST00000442321 338 ntBASIC15.49■□□□□ 0.07
NDUFA11Q86Y39 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC15.49■□□□□ 0.07
NDUFA11Q86Y39 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NDUFA11Q86Y39 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
NDUFA11Q86Y39 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
NDUFA11Q86Y39 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC15.49■□□□□ 0.07
NDUFA11Q86Y39 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC15.49■□□□□ 0.07
NDUFA11Q86Y39 AF186192.3-201ENST00000583427 947 ntBASIC15.49■□□□□ 0.07
NDUFA11Q86Y39 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NDUFA11Q86Y39 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NDUFA11Q86Y39 AC026471.5-201ENST00000615068 467 ntBASIC15.49■□□□□ 0.07
NDUFA11Q86Y39 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC15.49■□□□□ 0.07
NDUFA11Q86Y39 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDUFA11Q86Y39 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDUFA11Q86Y39 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
NDUFA11Q86Y39 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NDUFA11Q86Y39 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms