Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
MRPL55Q7Z7F7 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
MRPL55Q7Z7F7 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
MRPL55Q7Z7F7 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
MRPL55Q7Z7F7 SMG8-203ENST00000578922 2178 ntBASIC12.84□□□□□ -0.35
MRPL55Q7Z7F7 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC12.84□□□□□ -0.35
MRPL55Q7Z7F7 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC12.84□□□□□ -0.35
MRPL55Q7Z7F7 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC12.84□□□□□ -0.35
MRPL55Q7Z7F7 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
MRPL55Q7Z7F7 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC12.84□□□□□ -0.35
MRPL55Q7Z7F7 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC12.84□□□□□ -0.35
MRPL55Q7Z7F7 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
MRPL55Q7Z7F7 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
MRPL55Q7Z7F7 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
MRPL55Q7Z7F7 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC12.83□□□□□ -0.35
MRPL55Q7Z7F7 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
MRPL55Q7Z7F7 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
MRPL55Q7Z7F7 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MRPL55Q7Z7F7 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MRPL55Q7Z7F7 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC12.83□□□□□ -0.36
MRPL55Q7Z7F7 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
MRPL55Q7Z7F7 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MRPL55Q7Z7F7 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
MRPL55Q7Z7F7 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC12.83□□□□□ -0.36
MRPL55Q7Z7F7 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
MRPL55Q7Z7F7 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
MRPL55Q7Z7F7 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
MRPL55Q7Z7F7 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MRPL55Q7Z7F7 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
MRPL55Q7Z7F7 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC12.83□□□□□ -0.36
MRPL55Q7Z7F7 KRT18P11-201ENST00000435214 1283 ntBASIC12.83□□□□□ -0.36
MRPL55Q7Z7F7 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC12.83□□□□□ -0.36
MRPL55Q7Z7F7 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
MRPL55Q7Z7F7 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
MRPL55Q7Z7F7 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC12.83□□□□□ -0.36
MRPL55Q7Z7F7 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
MRPL55Q7Z7F7 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC12.83□□□□□ -0.36
MRPL55Q7Z7F7 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC12.83□□□□□ -0.36
MRPL55Q7Z7F7 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
MRPL55Q7Z7F7 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC12.83□□□□□ -0.36
MRPL55Q7Z7F7 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC12.83□□□□□ -0.36
MRPL55Q7Z7F7 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
MRPL55Q7Z7F7 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MRPL55Q7Z7F7 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
MRPL55Q7Z7F7 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
MRPL55Q7Z7F7 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MRPL55Q7Z7F7 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MRPL55Q7Z7F7 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
MRPL55Q7Z7F7 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC12.83□□□□□ -0.36
MRPL55Q7Z7F7 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
MRPL55Q7Z7F7 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MRPL55Q7Z7F7 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MRPL55Q7Z7F7 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC12.83□□□□□ -0.36
MRPL55Q7Z7F7 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC12.82□□□□□ -0.36
MRPL55Q7Z7F7 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
MRPL55Q7Z7F7 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
MRPL55Q7Z7F7 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC12.82□□□□□ -0.36
MRPL55Q7Z7F7 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
MRPL55Q7Z7F7 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC12.82□□□□□ -0.36
MRPL55Q7Z7F7 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
MRPL55Q7Z7F7 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
MRPL55Q7Z7F7 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC12.82□□□□□ -0.36
MRPL55Q7Z7F7 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
MRPL55Q7Z7F7 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
MRPL55Q7Z7F7 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
MRPL55Q7Z7F7 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC12.82□□□□□ -0.36
MRPL55Q7Z7F7 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
MRPL55Q7Z7F7 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
MRPL55Q7Z7F7 TERF1P5-201ENST00000477545 1207 ntBASIC12.82□□□□□ -0.36
MRPL55Q7Z7F7 CASP6-205ENST00000505486 538 ntTSL 4 BASIC12.82□□□□□ -0.36
MRPL55Q7Z7F7 AL591742.1-201ENST00000604433 565 ntBASIC12.82□□□□□ -0.36
MRPL55Q7Z7F7 AC010536.3-201ENST00000620306 533 ntBASIC12.82□□□□□ -0.36
MRPL55Q7Z7F7 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
MRPL55Q7Z7F7 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
MRPL55Q7Z7F7 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
MRPL55Q7Z7F7 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
MRPL55Q7Z7F7 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
MRPL55Q7Z7F7 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
MRPL55Q7Z7F7 DPP3P2-201ENST00000416030 1696 ntBASIC12.82□□□□□ -0.36
MRPL55Q7Z7F7 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
MRPL55Q7Z7F7 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
MRPL55Q7Z7F7 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC12.82□□□□□ -0.36
MRPL55Q7Z7F7 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
MRPL55Q7Z7F7 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
MRPL55Q7Z7F7 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC12.81□□□□□ -0.36
MRPL55Q7Z7F7 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
MRPL55Q7Z7F7 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
MRPL55Q7Z7F7 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
MRPL55Q7Z7F7 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
MRPL55Q7Z7F7 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
MRPL55Q7Z7F7 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
MRPL55Q7Z7F7 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC12.81□□□□□ -0.36
MRPL55Q7Z7F7 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
MRPL55Q7Z7F7 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
MRPL55Q7Z7F7 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
MRPL55Q7Z7F7 BMP1-204ENST00000397814 836 ntTSL 4 BASIC12.81□□□□□ -0.36
MRPL55Q7Z7F7 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
MRPL55Q7Z7F7 PBX1-209ENST00000485769 834 ntTSL 2 BASIC12.81□□□□□ -0.36
MRPL55Q7Z7F7 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC12.81□□□□□ -0.36
MRPL55Q7Z7F7 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms