Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 PRKY-204ENST00000533551 1019 ntBASIC18.49■□□□□ 0.55
H3F3CQ6NXT2 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.49■□□□□ 0.55
H3F3CQ6NXT2 FP700111.2-201ENST00000619190 1892 ntBASIC18.49■□□□□ 0.55
H3F3CQ6NXT2 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
H3F3CQ6NXT2 AC092667.1-201ENST00000434301 2586 ntBASIC18.49■□□□□ 0.55
H3F3CQ6NXT2 AC007225.1-201ENST00000566331 1836 ntBASIC18.49■□□□□ 0.55
H3F3CQ6NXT2 KRT8P20-201ENST00000423953 1409 ntBASIC18.49■□□□□ 0.55
H3F3CQ6NXT2 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
H3F3CQ6NXT2 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.48■□□□□ 0.55
H3F3CQ6NXT2 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
H3F3CQ6NXT2 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
H3F3CQ6NXT2 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
H3F3CQ6NXT2 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.48■□□□□ 0.55
H3F3CQ6NXT2 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
H3F3CQ6NXT2 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
H3F3CQ6NXT2 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.48■□□□□ 0.55
H3F3CQ6NXT2 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.48■□□□□ 0.55
H3F3CQ6NXT2 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.48■□□□□ 0.55
H3F3CQ6NXT2 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
H3F3CQ6NXT2 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.48■□□□□ 0.55
H3F3CQ6NXT2 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
H3F3CQ6NXT2 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
H3F3CQ6NXT2 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
H3F3CQ6NXT2 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
H3F3CQ6NXT2 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
H3F3CQ6NXT2 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
H3F3CQ6NXT2 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
H3F3CQ6NXT2 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
H3F3CQ6NXT2 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
H3F3CQ6NXT2 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
H3F3CQ6NXT2 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.47■□□□□ 0.55
H3F3CQ6NXT2 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
H3F3CQ6NXT2 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
H3F3CQ6NXT2 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.47■□□□□ 0.55
H3F3CQ6NXT2 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
H3F3CQ6NXT2 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
H3F3CQ6NXT2 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
H3F3CQ6NXT2 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
H3F3CQ6NXT2 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
H3F3CQ6NXT2 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
H3F3CQ6NXT2 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
H3F3CQ6NXT2 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
H3F3CQ6NXT2 AC012618.2-201ENST00000428058 849 ntBASIC18.47■□□□□ 0.55
H3F3CQ6NXT2 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.47■□□□□ 0.55
H3F3CQ6NXT2 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
H3F3CQ6NXT2 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
H3F3CQ6NXT2 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
H3F3CQ6NXT2 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.47■□□□□ 0.55
H3F3CQ6NXT2 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.47■□□□□ 0.55
H3F3CQ6NXT2 KRT8P17-201ENST00000453110 1448 ntBASIC18.47■□□□□ 0.55
H3F3CQ6NXT2 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.47■□□□□ 0.55
H3F3CQ6NXT2 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
H3F3CQ6NXT2 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
H3F3CQ6NXT2 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
H3F3CQ6NXT2 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
H3F3CQ6NXT2 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
H3F3CQ6NXT2 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
H3F3CQ6NXT2 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
H3F3CQ6NXT2 AC073130.3-201ENST00000624389 2278 ntBASIC18.46■□□□□ 0.55
H3F3CQ6NXT2 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
H3F3CQ6NXT2 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.46■□□□□ 0.55
H3F3CQ6NXT2 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
H3F3CQ6NXT2 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.46■□□□□ 0.55
H3F3CQ6NXT2 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.46■□□□□ 0.55
H3F3CQ6NXT2 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
H3F3CQ6NXT2 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
H3F3CQ6NXT2 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.46■□□□□ 0.55
H3F3CQ6NXT2 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
H3F3CQ6NXT2 AC005229.4-201ENST00000610085 2198 ntBASIC18.46■□□□□ 0.55
H3F3CQ6NXT2 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
H3F3CQ6NXT2 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.46■□□□□ 0.55
H3F3CQ6NXT2 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
H3F3CQ6NXT2 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
H3F3CQ6NXT2 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
H3F3CQ6NXT2 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.45■□□□□ 0.54
H3F3CQ6NXT2 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
H3F3CQ6NXT2 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.45■□□□□ 0.54
H3F3CQ6NXT2 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
H3F3CQ6NXT2 RPS2P55-201ENST00000397318 883 ntBASIC18.45■□□□□ 0.54
H3F3CQ6NXT2 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
H3F3CQ6NXT2 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.45■□□□□ 0.54
H3F3CQ6NXT2 AC107956.1-201ENST00000494359 873 ntBASIC18.45■□□□□ 0.54
H3F3CQ6NXT2 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.45■□□□□ 0.54
H3F3CQ6NXT2 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.45■□□□□ 0.54
H3F3CQ6NXT2 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.45■□□□□ 0.54
H3F3CQ6NXT2 MIR4497-201ENST00000583208 89 ntBASIC18.45■□□□□ 0.54
H3F3CQ6NXT2 AC233702.5-201ENST00000584107 538 ntBASIC18.45■□□□□ 0.54
H3F3CQ6NXT2 AL121906.2-201ENST00000621597 723 ntBASIC18.45■□□□□ 0.54
H3F3CQ6NXT2 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
H3F3CQ6NXT2 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
H3F3CQ6NXT2 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
H3F3CQ6NXT2 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.45■□□□□ 0.54
H3F3CQ6NXT2 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
H3F3CQ6NXT2 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
H3F3CQ6NXT2 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.45■□□□□ 0.54
H3F3CQ6NXT2 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
H3F3CQ6NXT2 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
H3F3CQ6NXT2 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.44■□□□□ 0.54
H3F3CQ6NXT2 AC124283.5-201ENST00000624661 1809 ntBASIC18.44■□□□□ 0.54
H3F3CQ6NXT2 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms