Protein–RNA interactions for Protein: Q6FI13

HIST2H2AA3, Histone H2A type 2-A, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2AA3Q6FI13 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HIST2H2AA3Q6FI13 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
HIST2H2AA3Q6FI13 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.31■□□□□ 0.68
HIST2H2AA3Q6FI13 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.31■□□□□ 0.68
HIST2H2AA3Q6FI13 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HIST2H2AA3Q6FI13 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.31■□□□□ 0.68
HIST2H2AA3Q6FI13 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIST2H2AA3Q6FI13 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIST2H2AA3Q6FI13 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIST2H2AA3Q6FI13 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.3■□□□□ 0.68
HIST2H2AA3Q6FI13 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HIST2H2AA3Q6FI13 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIST2H2AA3Q6FI13 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIST2H2AA3Q6FI13 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HIST2H2AA3Q6FI13 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.3■□□□□ 0.68
HIST2H2AA3Q6FI13 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.3■□□□□ 0.68
HIST2H2AA3Q6FI13 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIST2H2AA3Q6FI13 KRT8P20-201ENST00000423953 1409 ntBASIC19.3■□□□□ 0.68
HIST2H2AA3Q6FI13 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.3■□□□□ 0.68
HIST2H2AA3Q6FI13 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIST2H2AA3Q6FI13 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
HIST2H2AA3Q6FI13 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HIST2H2AA3Q6FI13 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.3■□□□□ 0.68
HIST2H2AA3Q6FI13 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIST2H2AA3Q6FI13 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIST2H2AA3Q6FI13 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
HIST2H2AA3Q6FI13 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIST2H2AA3Q6FI13 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HIST2H2AA3Q6FI13 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.29■□□□□ 0.68
HIST2H2AA3Q6FI13 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.29■□□□□ 0.68
HIST2H2AA3Q6FI13 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HIST2H2AA3Q6FI13 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
HIST2H2AA3Q6FI13 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HIST2H2AA3Q6FI13 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HIST2H2AA3Q6FI13 BX119927.1-201ENST00000636596 1552 ntBASIC19.29■□□□□ 0.68
HIST2H2AA3Q6FI13 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HIST2H2AA3Q6FI13 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HIST2H2AA3Q6FI13 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HIST2H2AA3Q6FI13 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
HIST2H2AA3Q6FI13 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
HIST2H2AA3Q6FI13 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.29■□□□□ 0.68
HIST2H2AA3Q6FI13 AL031963.3-201ENST00000606441 850 ntBASIC19.29■□□□□ 0.68
HIST2H2AA3Q6FI13 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HIST2H2AA3Q6FI13 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HIST2H2AA3Q6FI13 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.29■□□□□ 0.68
HIST2H2AA3Q6FI13 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.29■□□□□ 0.68
HIST2H2AA3Q6FI13 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HIST2H2AA3Q6FI13 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.29■□□□□ 0.68
HIST2H2AA3Q6FI13 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HIST2H2AA3Q6FI13 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.29■□□□□ 0.68
HIST2H2AA3Q6FI13 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HIST2H2AA3Q6FI13 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HIST2H2AA3Q6FI13 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.28■□□□□ 0.68
HIST2H2AA3Q6FI13 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
HIST2H2AA3Q6FI13 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.28■□□□□ 0.68
HIST2H2AA3Q6FI13 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HIST2H2AA3Q6FI13 KRT16P6-202ENST00000425692 1426 ntBASIC19.28■□□□□ 0.68
HIST2H2AA3Q6FI13 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.28■□□□□ 0.68
HIST2H2AA3Q6FI13 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HIST2H2AA3Q6FI13 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.28■□□□□ 0.68
HIST2H2AA3Q6FI13 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.28■□□□□ 0.68
HIST2H2AA3Q6FI13 GPX1P1-201ENST00000388829 606 ntBASIC19.28■□□□□ 0.68
HIST2H2AA3Q6FI13 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.28■□□□□ 0.68
HIST2H2AA3Q6FI13 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.28■□□□□ 0.68
HIST2H2AA3Q6FI13 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
HIST2H2AA3Q6FI13 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HIST2H2AA3Q6FI13 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.28■□□□□ 0.68
HIST2H2AA3Q6FI13 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.28■□□□□ 0.68
HIST2H2AA3Q6FI13 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.28■□□□□ 0.68
HIST2H2AA3Q6FI13 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HIST2H2AA3Q6FI13 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.28■□□□□ 0.68
HIST2H2AA3Q6FI13 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HIST2H2AA3Q6FI13 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
HIST2H2AA3Q6FI13 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HIST2H2AA3Q6FI13 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.28■□□□□ 0.68
HIST2H2AA3Q6FI13 AC112907.3-201ENST00000577781 2400 ntBASIC19.27■□□□□ 0.68
HIST2H2AA3Q6FI13 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
HIST2H2AA3Q6FI13 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.27■□□□□ 0.68
HIST2H2AA3Q6FI13 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HIST2H2AA3Q6FI13 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HIST2H2AA3Q6FI13 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
HIST2H2AA3Q6FI13 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HIST2H2AA3Q6FI13 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HIST2H2AA3Q6FI13 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
HIST2H2AA3Q6FI13 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.27■□□□□ 0.68
HIST2H2AA3Q6FI13 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HIST2H2AA3Q6FI13 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
HIST2H2AA3Q6FI13 MIPEPP3-201ENST00000412105 444 ntBASIC19.27■□□□□ 0.68
HIST2H2AA3Q6FI13 NCF1B-203ENST00000435988 1254 ntBASIC19.27■□□□□ 0.68
HIST2H2AA3Q6FI13 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HIST2H2AA3Q6FI13 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
HIST2H2AA3Q6FI13 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
HIST2H2AA3Q6FI13 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
HIST2H2AA3Q6FI13 TCF3P1-201ENST00000423021 1937 ntBASIC19.27■□□□□ 0.67
HIST2H2AA3Q6FI13 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.67
HIST2H2AA3Q6FI13 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HIST2H2AA3Q6FI13 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HIST2H2AA3Q6FI13 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HIST2H2AA3Q6FI13 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HIST2H2AA3Q6FI13 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms