Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LYSMD4Q5XG99 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.69■□□□□ 0.74
LYSMD4Q5XG99 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LYSMD4Q5XG99 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LYSMD4Q5XG99 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LYSMD4Q5XG99 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.68■□□□□ 0.74
LYSMD4Q5XG99 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
LYSMD4Q5XG99 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LYSMD4Q5XG99 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
LYSMD4Q5XG99 AP006587.1-201ENST00000534129 1502 ntBASIC19.68■□□□□ 0.74
LYSMD4Q5XG99 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LYSMD4Q5XG99 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.68■□□□□ 0.74
LYSMD4Q5XG99 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LYSMD4Q5XG99 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LYSMD4Q5XG99 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.68■□□□□ 0.74
LYSMD4Q5XG99 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.68■□□□□ 0.74
LYSMD4Q5XG99 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
LYSMD4Q5XG99 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.68■□□□□ 0.74
LYSMD4Q5XG99 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LYSMD4Q5XG99 AC010203.1-204ENST00000548782 407 ntBASIC19.68■□□□□ 0.74
LYSMD4Q5XG99 C1QL1P1-201ENST00000568105 661 ntBASIC19.68■□□□□ 0.74
LYSMD4Q5XG99 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.68■□□□□ 0.74
LYSMD4Q5XG99 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.68■□□□□ 0.74
LYSMD4Q5XG99 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
LYSMD4Q5XG99 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.68■□□□□ 0.74
LYSMD4Q5XG99 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.68■□□□□ 0.74
LYSMD4Q5XG99 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LYSMD4Q5XG99 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.68■□□□□ 0.74
LYSMD4Q5XG99 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
LYSMD4Q5XG99 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LYSMD4Q5XG99 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LYSMD4Q5XG99 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LYSMD4Q5XG99 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
LYSMD4Q5XG99 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.68■□□□□ 0.74
LYSMD4Q5XG99 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.68■□□□□ 0.74
LYSMD4Q5XG99 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
LYSMD4Q5XG99 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LYSMD4Q5XG99 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LYSMD4Q5XG99 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LYSMD4Q5XG99 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LYSMD4Q5XG99 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
LYSMD4Q5XG99 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
LYSMD4Q5XG99 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.67■□□□□ 0.74
LYSMD4Q5XG99 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
LYSMD4Q5XG99 AL445675.2-201ENST00000620291 557 ntBASIC19.67■□□□□ 0.74
LYSMD4Q5XG99 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LYSMD4Q5XG99 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.67■□□□□ 0.74
LYSMD4Q5XG99 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.67■□□□□ 0.74
LYSMD4Q5XG99 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LYSMD4Q5XG99 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LYSMD4Q5XG99 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LYSMD4Q5XG99 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LYSMD4Q5XG99 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LYSMD4Q5XG99 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LYSMD4Q5XG99 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LYSMD4Q5XG99 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.66■□□□□ 0.74
LYSMD4Q5XG99 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.66■□□□□ 0.74
LYSMD4Q5XG99 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LYSMD4Q5XG99 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.66■□□□□ 0.74
LYSMD4Q5XG99 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.66■□□□□ 0.74
LYSMD4Q5XG99 AP005242.2-201ENST00000580065 1175 ntBASIC19.66■□□□□ 0.74
LYSMD4Q5XG99 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LYSMD4Q5XG99 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LYSMD4Q5XG99 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
LYSMD4Q5XG99 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.66■□□□□ 0.74
LYSMD4Q5XG99 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LYSMD4Q5XG99 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
LYSMD4Q5XG99 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LYSMD4Q5XG99 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LYSMD4Q5XG99 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.65■□□□□ 0.74
LYSMD4Q5XG99 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.65■□□□□ 0.74
LYSMD4Q5XG99 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LYSMD4Q5XG99 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LYSMD4Q5XG99 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LYSMD4Q5XG99 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LYSMD4Q5XG99 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LYSMD4Q5XG99 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.65■□□□□ 0.74
LYSMD4Q5XG99 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LYSMD4Q5XG99 EGLN1P1-201ENST00000531623 762 ntBASIC19.65■□□□□ 0.74
LYSMD4Q5XG99 DGCR10-201ENST00000609839 495 ntBASIC19.65■□□□□ 0.74
LYSMD4Q5XG99 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LYSMD4Q5XG99 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LYSMD4Q5XG99 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
LYSMD4Q5XG99 KRT8P17-201ENST00000453110 1448 ntBASIC19.65■□□□□ 0.74
LYSMD4Q5XG99 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
LYSMD4Q5XG99 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LYSMD4Q5XG99 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.65■□□□□ 0.74
LYSMD4Q5XG99 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
LYSMD4Q5XG99 Z98882.1-201ENST00000622160 2253 ntBASIC19.64■□□□□ 0.74
LYSMD4Q5XG99 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LYSMD4Q5XG99 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
LYSMD4Q5XG99 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LYSMD4Q5XG99 MESTP1-201ENST00000404287 994 ntBASIC19.64■□□□□ 0.73
LYSMD4Q5XG99 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.64■□□□□ 0.73
LYSMD4Q5XG99 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.64■□□□□ 0.73
LYSMD4Q5XG99 WWOX-216ENST00000569818 525 ntBASIC19.64■□□□□ 0.73
LYSMD4Q5XG99 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.64■□□□□ 0.73
LYSMD4Q5XG99 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
LYSMD4Q5XG99 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LYSMD4Q5XG99 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms