Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.57■□□□□ 0.72
RIF1Q5UIP0 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.57■□□□□ 0.72
RIF1Q5UIP0 NPAP1P7-201ENST00000613027 823 ntBASIC19.57■□□□□ 0.72
RIF1Q5UIP0 AL023803.3-201ENST00000615559 522 ntBASIC19.57■□□□□ 0.72
RIF1Q5UIP0 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RIF1Q5UIP0 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RIF1Q5UIP0 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.57■□□□□ 0.72
RIF1Q5UIP0 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
RIF1Q5UIP0 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.57■□□□□ 0.72
RIF1Q5UIP0 AC023632.3-201ENST00000521633 145 ntBASIC19.57■□□□□ 0.72
RIF1Q5UIP0 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.57■□□□□ 0.72
RIF1Q5UIP0 AC140113.3-201ENST00000605663 199 ntBASIC19.57■□□□□ 0.72
RIF1Q5UIP0 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RIF1Q5UIP0 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
RIF1Q5UIP0 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RIF1Q5UIP0 AC004870.1-201ENST00000315132 882 ntBASIC19.56■□□□□ 0.72
RIF1Q5UIP0 PRSS44-201ENST00000515154 1146 ntBASIC19.56■□□□□ 0.72
RIF1Q5UIP0 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.56■□□□□ 0.72
RIF1Q5UIP0 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RIF1Q5UIP0 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RIF1Q5UIP0 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RIF1Q5UIP0 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RIF1Q5UIP0 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RIF1Q5UIP0 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.56■□□□□ 0.72
RIF1Q5UIP0 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
RIF1Q5UIP0 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
RIF1Q5UIP0 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
RIF1Q5UIP0 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RIF1Q5UIP0 AC092338.2-201ENST00000568827 1415 ntBASIC19.55■□□□□ 0.72
RIF1Q5UIP0 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
RIF1Q5UIP0 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.55■□□□□ 0.72
RIF1Q5UIP0 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
RIF1Q5UIP0 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.55■□□□□ 0.72
RIF1Q5UIP0 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.55■□□□□ 0.72
RIF1Q5UIP0 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.55■□□□□ 0.72
RIF1Q5UIP0 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RIF1Q5UIP0 AC104692.2-201ENST00000603054 253 ntBASIC19.55■□□□□ 0.72
RIF1Q5UIP0 LINC02084-201ENST00000606069 1096 ntBASIC19.55■□□□□ 0.72
RIF1Q5UIP0 AC141257.4-201ENST00000634557 245 ntBASIC19.55■□□□□ 0.72
RIF1Q5UIP0 AC136944.6-201ENST00000634818 245 ntBASIC19.55■□□□□ 0.72
RIF1Q5UIP0 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RIF1Q5UIP0 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.55■□□□□ 0.72
RIF1Q5UIP0 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RIF1Q5UIP0 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RIF1Q5UIP0 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RIF1Q5UIP0 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RIF1Q5UIP0 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RIF1Q5UIP0 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RIF1Q5UIP0 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
RIF1Q5UIP0 AC010653.2-201ENST00000623505 997 ntBASIC19.54■□□□□ 0.72
RIF1Q5UIP0 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RIF1Q5UIP0 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.54■□□□□ 0.72
RIF1Q5UIP0 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RIF1Q5UIP0 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.54■□□□□ 0.72
RIF1Q5UIP0 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RIF1Q5UIP0 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RIF1Q5UIP0 CCR12P-201ENST00000446203 998 ntBASIC19.54■□□□□ 0.72
RIF1Q5UIP0 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
RIF1Q5UIP0 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.54■□□□□ 0.72
RIF1Q5UIP0 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
RIF1Q5UIP0 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.54■□□□□ 0.72
RIF1Q5UIP0 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
RIF1Q5UIP0 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.54■□□□□ 0.72
RIF1Q5UIP0 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RIF1Q5UIP0 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RIF1Q5UIP0 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RIF1Q5UIP0 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RIF1Q5UIP0 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.53■□□□□ 0.72
RIF1Q5UIP0 AL441883.1-201ENST00000566170 1045 ntBASIC19.53■□□□□ 0.72
RIF1Q5UIP0 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.53■□□□□ 0.72
RIF1Q5UIP0 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RIF1Q5UIP0 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
RIF1Q5UIP0 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.53■□□□□ 0.72
RIF1Q5UIP0 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
RIF1Q5UIP0 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RIF1Q5UIP0 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RIF1Q5UIP0 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.53■□□□□ 0.72
RIF1Q5UIP0 AC096733.2-201ENST00000609937 1394 ntBASIC19.53■□□□□ 0.72
RIF1Q5UIP0 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.53■□□□□ 0.72
RIF1Q5UIP0 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
RIF1Q5UIP0 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RIF1Q5UIP0 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.52■□□□□ 0.72
RIF1Q5UIP0 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.52■□□□□ 0.72
RIF1Q5UIP0 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.52■□□□□ 0.72
RIF1Q5UIP0 AP000692.2-201ENST00000608391 879 ntBASIC19.52■□□□□ 0.72
RIF1Q5UIP0 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
RIF1Q5UIP0 AL023973.1-201ENST00000624619 620 ntBASIC19.52■□□□□ 0.72
RIF1Q5UIP0 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RIF1Q5UIP0 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RIF1Q5UIP0 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.52■□□□□ 0.72
RIF1Q5UIP0 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RIF1Q5UIP0 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
RIF1Q5UIP0 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RIF1Q5UIP0 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19.52■□□□□ 0.72
RIF1Q5UIP0 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.52■□□□□ 0.72
RIF1Q5UIP0 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RIF1Q5UIP0 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RIF1Q5UIP0 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.71
RIF1Q5UIP0 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
RIF1Q5UIP0 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms