Protein–RNA interactions for Protein: Q5T9S5

CCDC18, Coiled-coil domain-containing protein 18, humanhuman

Predictions only

Length 1,454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18Q5T9S5 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
CCDC18Q5T9S5 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC31.07■■■□□ 2.56
CCDC18Q5T9S5 AC006128.1-201ENST00000624704 1661 ntBASIC31.06■■■□□ 2.56
CCDC18Q5T9S5 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC31.06■■■□□ 2.56
CCDC18Q5T9S5 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
CCDC18Q5T9S5 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC31.06■■■□□ 2.56
CCDC18Q5T9S5 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC31.06■■■□□ 2.56
CCDC18Q5T9S5 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
CCDC18Q5T9S5 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC31.06■■■□□ 2.56
CCDC18Q5T9S5 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC31.06■■■□□ 2.56
CCDC18Q5T9S5 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
CCDC18Q5T9S5 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC31.06■■■□□ 2.56
CCDC18Q5T9S5 DPP3P2-201ENST00000416030 1696 ntBASIC31.06■■■□□ 2.56
CCDC18Q5T9S5 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
CCDC18Q5T9S5 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CCDC18Q5T9S5 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC31.05■■■□□ 2.56
CCDC18Q5T9S5 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CCDC18Q5T9S5 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC31.05■■■□□ 2.56
CCDC18Q5T9S5 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC31.05■■■□□ 2.56
CCDC18Q5T9S5 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CCDC18Q5T9S5 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CCDC18Q5T9S5 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC31.05■■■□□ 2.56
CCDC18Q5T9S5 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC31.05■■■□□ 2.56
CCDC18Q5T9S5 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC31.05■■■□□ 2.56
CCDC18Q5T9S5 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC31.05■■■□□ 2.56
CCDC18Q5T9S5 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC31.05■■■□□ 2.56
CCDC18Q5T9S5 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC31.04■■■□□ 2.56
CCDC18Q5T9S5 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC31.04■■■□□ 2.56
CCDC18Q5T9S5 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
CCDC18Q5T9S5 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC31.04■■■□□ 2.56
CCDC18Q5T9S5 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC31.04■■■□□ 2.56
CCDC18Q5T9S5 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC31.04■■■□□ 2.56
CCDC18Q5T9S5 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC31.04■■■□□ 2.56
CCDC18Q5T9S5 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
CCDC18Q5T9S5 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
CCDC18Q5T9S5 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC31.04■■■□□ 2.56
CCDC18Q5T9S5 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC31.04■■■□□ 2.56
CCDC18Q5T9S5 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
CCDC18Q5T9S5 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
CCDC18Q5T9S5 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC31.03■■■□□ 2.56
CCDC18Q5T9S5 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC31.03■■■□□ 2.56
CCDC18Q5T9S5 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
CCDC18Q5T9S5 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC31.03■■■□□ 2.56
CCDC18Q5T9S5 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC31.03■■■□□ 2.56
CCDC18Q5T9S5 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC31.03■■■□□ 2.56
CCDC18Q5T9S5 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC31.03■■■□□ 2.56
CCDC18Q5T9S5 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC31.03■■■□□ 2.56
CCDC18Q5T9S5 P4HB-223ENST00000576390 439 ntTSL 4 BASIC31.03■■■□□ 2.56
CCDC18Q5T9S5 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC31.03■■■□□ 2.56
CCDC18Q5T9S5 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CCDC18Q5T9S5 BID-203ENST00000399765 1879 ntTSL 2 BASIC31.02■■■□□ 2.56
CCDC18Q5T9S5 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC31.02■■■□□ 2.56
CCDC18Q5T9S5 AL445675.2-201ENST00000620291 557 ntBASIC31.02■■■□□ 2.56
CCDC18Q5T9S5 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
CCDC18Q5T9S5 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC31.02■■■□□ 2.56
CCDC18Q5T9S5 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC31.02■■■□□ 2.56
CCDC18Q5T9S5 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC31.02■■■□□ 2.56
CCDC18Q5T9S5 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
CCDC18Q5T9S5 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
CCDC18Q5T9S5 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
CCDC18Q5T9S5 AL390955.1-201ENST00000428694 934 ntBASIC31.01■■■□□ 2.56
CCDC18Q5T9S5 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC31.01■■■□□ 2.56
CCDC18Q5T9S5 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC31.01■■■□□ 2.56
CCDC18Q5T9S5 FITM1-202ENST00000559294 800 ntBASIC31.01■■■□□ 2.56
CCDC18Q5T9S5 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC31.01■■■□□ 2.56
CCDC18Q5T9S5 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC31.01■■■□□ 2.56
CCDC18Q5T9S5 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
CCDC18Q5T9S5 AF106564.1-201ENST00000607058 2553 ntBASIC31.01■■■□□ 2.55
CCDC18Q5T9S5 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC31.01■■■□□ 2.55
CCDC18Q5T9S5 MESTP1-201ENST00000404287 994 ntBASIC31.01■■■□□ 2.55
CCDC18Q5T9S5 TMPOP1-202ENST00000424642 1267 ntBASIC31.01■■■□□ 2.55
CCDC18Q5T9S5 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC31.01■■■□□ 2.55
CCDC18Q5T9S5 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC31.01■■■□□ 2.55
CCDC18Q5T9S5 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC31.01■■■□□ 2.55
CCDC18Q5T9S5 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC31■■■□□ 2.55
CCDC18Q5T9S5 AP006587.1-201ENST00000534129 1502 ntBASIC31■■■□□ 2.55
CCDC18Q5T9S5 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC31■■■□□ 2.55
CCDC18Q5T9S5 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC31■■■□□ 2.55
CCDC18Q5T9S5 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC31■■■□□ 2.55
CCDC18Q5T9S5 FP700111.2-201ENST00000619190 1892 ntBASIC31■■■□□ 2.55
CCDC18Q5T9S5 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC31■■■□□ 2.55
CCDC18Q5T9S5 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC31■■■□□ 2.55
CCDC18Q5T9S5 AC113347.1-201ENST00000413321 391 ntBASIC31■■■□□ 2.55
CCDC18Q5T9S5 KRT18P16-201ENST00000510337 1294 ntBASIC31■■■□□ 2.55
CCDC18Q5T9S5 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC30.99■■■□□ 2.55
CCDC18Q5T9S5 TFP1-202ENST00000475455 1573 ntBASIC30.99■■■□□ 2.55
CCDC18Q5T9S5 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC30.99■■■□□ 2.55
CCDC18Q5T9S5 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC30.99■■■□□ 2.55
CCDC18Q5T9S5 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
CCDC18Q5T9S5 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC30.99■■■□□ 2.55
CCDC18Q5T9S5 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC30.99■■■□□ 2.55
CCDC18Q5T9S5 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC30.99■■■□□ 2.55
CCDC18Q5T9S5 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC30.99■■■□□ 2.55
CCDC18Q5T9S5 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC30.99■■■□□ 2.55
CCDC18Q5T9S5 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC30.99■■■□□ 2.55
CCDC18Q5T9S5 DGCR10-201ENST00000609839 495 ntBASIC30.99■■■□□ 2.55
CCDC18Q5T9S5 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC30.99■■■□□ 2.55
CCDC18Q5T9S5 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
CCDC18Q5T9S5 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC30.98■■■□□ 2.55
CCDC18Q5T9S5 CR392000.1-201ENST00000624770 1228 ntBASIC30.98■■■□□ 2.55
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms