Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
LRIF1Q5T3J3 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRIF1Q5T3J3 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.82■□□□□ 0.6
LRIF1Q5T3J3 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.82■□□□□ 0.6
LRIF1Q5T3J3 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.82■□□□□ 0.6
LRIF1Q5T3J3 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRIF1Q5T3J3 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRIF1Q5T3J3 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
LRIF1Q5T3J3 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRIF1Q5T3J3 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRIF1Q5T3J3 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRIF1Q5T3J3 ZNRF2P3-201ENST00000424200 374 ntBASIC18.82■□□□□ 0.6
LRIF1Q5T3J3 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.82■□□□□ 0.6
LRIF1Q5T3J3 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.82■□□□□ 0.6
LRIF1Q5T3J3 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LRIF1Q5T3J3 AC013268.1-206ENST00000638368 961 ntBASIC18.82■□□□□ 0.6
LRIF1Q5T3J3 AC112229.1-201ENST00000639295 961 ntBASIC18.82■□□□□ 0.6
LRIF1Q5T3J3 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.82■□□□□ 0.6
LRIF1Q5T3J3 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRIF1Q5T3J3 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRIF1Q5T3J3 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
LRIF1Q5T3J3 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
LRIF1Q5T3J3 Z82202.1-201ENST00000623446 1880 ntBASIC18.82■□□□□ 0.6
LRIF1Q5T3J3 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.81■□□□□ 0.6
LRIF1Q5T3J3 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.81■□□□□ 0.6
LRIF1Q5T3J3 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
LRIF1Q5T3J3 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRIF1Q5T3J3 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRIF1Q5T3J3 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRIF1Q5T3J3 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
LRIF1Q5T3J3 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRIF1Q5T3J3 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRIF1Q5T3J3 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRIF1Q5T3J3 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRIF1Q5T3J3 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.81■□□□□ 0.6
LRIF1Q5T3J3 AL031963.3-201ENST00000606441 850 ntBASIC18.81■□□□□ 0.6
LRIF1Q5T3J3 AC100791.3-201ENST00000617619 330 ntBASIC18.81■□□□□ 0.6
LRIF1Q5T3J3 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LRIF1Q5T3J3 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRIF1Q5T3J3 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
LRIF1Q5T3J3 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRIF1Q5T3J3 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRIF1Q5T3J3 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.81■□□□□ 0.6
LRIF1Q5T3J3 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LRIF1Q5T3J3 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.81■□□□□ 0.6
LRIF1Q5T3J3 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
LRIF1Q5T3J3 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRIF1Q5T3J3 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LRIF1Q5T3J3 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LRIF1Q5T3J3 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRIF1Q5T3J3 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRIF1Q5T3J3 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRIF1Q5T3J3 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.8■□□□□ 0.6
LRIF1Q5T3J3 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRIF1Q5T3J3 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.8■□□□□ 0.6
LRIF1Q5T3J3 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.8■□□□□ 0.6
LRIF1Q5T3J3 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LRIF1Q5T3J3 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LRIF1Q5T3J3 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.8■□□□□ 0.6
LRIF1Q5T3J3 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRIF1Q5T3J3 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRIF1Q5T3J3 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.8■□□□□ 0.6
LRIF1Q5T3J3 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.8■□□□□ 0.6
LRIF1Q5T3J3 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.8■□□□□ 0.6
LRIF1Q5T3J3 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.8■□□□□ 0.6
LRIF1Q5T3J3 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
LRIF1Q5T3J3 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRIF1Q5T3J3 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRIF1Q5T3J3 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.8■□□□□ 0.6
LRIF1Q5T3J3 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRIF1Q5T3J3 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.8■□□□□ 0.6
LRIF1Q5T3J3 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRIF1Q5T3J3 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRIF1Q5T3J3 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRIF1Q5T3J3 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRIF1Q5T3J3 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.8■□□□□ 0.6
LRIF1Q5T3J3 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRIF1Q5T3J3 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
LRIF1Q5T3J3 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRIF1Q5T3J3 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
LRIF1Q5T3J3 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRIF1Q5T3J3 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
LRIF1Q5T3J3 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
LRIF1Q5T3J3 TNXA-203ENST00000507684 2038 ntBASIC18.79■□□□□ 0.6
LRIF1Q5T3J3 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.79■□□□□ 0.6
LRIF1Q5T3J3 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRIF1Q5T3J3 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRIF1Q5T3J3 MCRIP2P1-201ENST00000394346 511 ntBASIC18.79■□□□□ 0.6
LRIF1Q5T3J3 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.79■□□□□ 0.6
LRIF1Q5T3J3 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRIF1Q5T3J3 KRT16P6-202ENST00000425692 1426 ntBASIC18.79■□□□□ 0.6
LRIF1Q5T3J3 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
LRIF1Q5T3J3 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRIF1Q5T3J3 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRIF1Q5T3J3 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRIF1Q5T3J3 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRIF1Q5T3J3 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRIF1Q5T3J3 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
LRIF1Q5T3J3 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRIF1Q5T3J3 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms