Protein–RNA interactions for Protein: Q53F19

NCBP3, Nuclear cap-binding protein subunit 3, humanhuman

Known RBP Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3Q53F19 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC26.18■■□□□ 1.78
NCBP3Q53F19 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC26.18■■□□□ 1.78
NCBP3Q53F19 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC26.18■■□□□ 1.78
NCBP3Q53F19 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC26.18■■□□□ 1.78
NCBP3Q53F19 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
NCBP3Q53F19 AC009237.14-201ENST00000609975 1594 ntBASIC26.18■■□□□ 1.78
NCBP3Q53F19 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
NCBP3Q53F19 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC26.18■■□□□ 1.78
NCBP3Q53F19 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
NCBP3Q53F19 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
NCBP3Q53F19 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
NCBP3Q53F19 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
NCBP3Q53F19 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
NCBP3Q53F19 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC26.17■■□□□ 1.78
NCBP3Q53F19 KLF13-207ENST00000560473 489 ntTSL 3 BASIC26.17■■□□□ 1.78
NCBP3Q53F19 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC26.17■■□□□ 1.78
NCBP3Q53F19 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
NCBP3Q53F19 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
NCBP3Q53F19 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC26.17■■□□□ 1.78
NCBP3Q53F19 TMEM179-206ENST00000616017 1645 ntBASIC26.17■■□□□ 1.78
NCBP3Q53F19 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC26.17■■□□□ 1.78
NCBP3Q53F19 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
NCBP3Q53F19 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
NCBP3Q53F19 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC26.16■■□□□ 1.78
NCBP3Q53F19 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC26.16■■□□□ 1.78
NCBP3Q53F19 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC26.16■■□□□ 1.78
NCBP3Q53F19 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC26.16■■□□□ 1.78
NCBP3Q53F19 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC26.16■■□□□ 1.78
NCBP3Q53F19 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC26.16■■□□□ 1.78
NCBP3Q53F19 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC26.16■■□□□ 1.78
NCBP3Q53F19 GOLGA2P11-201ENST00000562660 1621 ntBASIC26.16■■□□□ 1.78
NCBP3Q53F19 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
NCBP3Q53F19 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
NCBP3Q53F19 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
NCBP3Q53F19 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
NCBP3Q53F19 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC26.16■■□□□ 1.78
NCBP3Q53F19 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
NCBP3Q53F19 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
NCBP3Q53F19 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC26.15■■□□□ 1.78
NCBP3Q53F19 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
NCBP3Q53F19 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
NCBP3Q53F19 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
NCBP3Q53F19 AL390719.1-204ENST00000412397 1219 ntBASIC26.15■■□□□ 1.78
NCBP3Q53F19 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC26.15■■□□□ 1.78
NCBP3Q53F19 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC26.15■■□□□ 1.78
NCBP3Q53F19 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC26.15■■□□□ 1.78
NCBP3Q53F19 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
NCBP3Q53F19 AL691432.2-201ENST00000607222 2038 ntBASIC26.15■■□□□ 1.78
NCBP3Q53F19 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC26.15■■□□□ 1.78
NCBP3Q53F19 MGA-212ENST00000619521 1496 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
NCBP3Q53F19 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
NCBP3Q53F19 AC092368.3-202ENST00000574180 1591 ntBASIC26.15■■□□□ 1.78
NCBP3Q53F19 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC26.15■■□□□ 1.78
NCBP3Q53F19 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC26.14■■□□□ 1.78
NCBP3Q53F19 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
NCBP3Q53F19 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
NCBP3Q53F19 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
NCBP3Q53F19 KLF2-202ENST00000592003 564 ntTSL 3 BASIC26.14■■□□□ 1.78
NCBP3Q53F19 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC26.14■■□□□ 1.78
NCBP3Q53F19 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC26.14■■□□□ 1.78
NCBP3Q53F19 INO80E-214ENST00000620599 515 ntTSL 2 BASIC26.14■■□□□ 1.78
NCBP3Q53F19 AL034417.3-201ENST00000641100 1043 ntBASIC26.14■■□□□ 1.78
NCBP3Q53F19 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.78
NCBP3Q53F19 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC26.14■■□□□ 1.78
NCBP3Q53F19 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC26.14■■□□□ 1.78
NCBP3Q53F19 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.77
NCBP3Q53F19 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.77
NCBP3Q53F19 STK25-204ENST00000405585 1643 ntTSL 2 BASIC26.14■■□□□ 1.77
NCBP3Q53F19 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
NCBP3Q53F19 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
NCBP3Q53F19 AP001271.2-201ENST00000624018 1556 ntBASIC26.13■■□□□ 1.77
NCBP3Q53F19 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
NCBP3Q53F19 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC26.13■■□□□ 1.77
NCBP3Q53F19 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
NCBP3Q53F19 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC26.13■■□□□ 1.77
NCBP3Q53F19 UNC93B5-201ENST00000530315 699 ntBASIC26.13■■□□□ 1.77
NCBP3Q53F19 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC26.13■■□□□ 1.77
NCBP3Q53F19 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC26.13■■□□□ 1.77
NCBP3Q53F19 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
NCBP3Q53F19 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC26.13■■□□□ 1.77
NCBP3Q53F19 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
NCBP3Q53F19 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
NCBP3Q53F19 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
NCBP3Q53F19 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC26.12■■□□□ 1.77
NCBP3Q53F19 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC26.12■■□□□ 1.77
NCBP3Q53F19 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
NCBP3Q53F19 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
NCBP3Q53F19 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC26.12■■□□□ 1.77
NCBP3Q53F19 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC26.12■■□□□ 1.77
NCBP3Q53F19 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC26.12■■□□□ 1.77
NCBP3Q53F19 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
NCBP3Q53F19 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
NCBP3Q53F19 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
NCBP3Q53F19 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
NCBP3Q53F19 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
NCBP3Q53F19 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
NCBP3Q53F19 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
NCBP3Q53F19 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
NCBP3Q53F19 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
NCBP3Q53F19 MOK-225ENST00000522867 1883 ntTSL 5 BASIC26.11■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms