Protein–RNA interactions for Protein: Q15428

SF3A2, Splicing factor 3A subunit 2, humanhuman

Known RBP Predictions only

Length 464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2Q15428 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
SF3A2Q15428 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.8■□□□□ 0.76
SF3A2Q15428 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SF3A2Q15428 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SF3A2Q15428 TPM4P1-201ENST00000436100 807 ntBASIC19.8■□□□□ 0.76
SF3A2Q15428 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SF3A2Q15428 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.8■□□□□ 0.76
SF3A2Q15428 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.8■□□□□ 0.76
SF3A2Q15428 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.8■□□□□ 0.76
SF3A2Q15428 AL358472.4-201ENST00000633140 710 ntBASIC19.8■□□□□ 0.76
SF3A2Q15428 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SF3A2Q15428 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.8■□□□□ 0.76
SF3A2Q15428 AL137060.1-201ENST00000618151 2648 ntBASIC19.8■□□□□ 0.76
SF3A2Q15428 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
SF3A2Q15428 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.8■□□□□ 0.76
SF3A2Q15428 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SF3A2Q15428 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SF3A2Q15428 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.79■□□□□ 0.76
SF3A2Q15428 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.79■□□□□ 0.76
SF3A2Q15428 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SF3A2Q15428 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SF3A2Q15428 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.79■□□□□ 0.76
SF3A2Q15428 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SF3A2Q15428 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SF3A2Q15428 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SF3A2Q15428 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.79■□□□□ 0.76
SF3A2Q15428 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SF3A2Q15428 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
SF3A2Q15428 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SF3A2Q15428 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SF3A2Q15428 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.79■□□□□ 0.76
SF3A2Q15428 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.79■□□□□ 0.76
SF3A2Q15428 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.79■□□□□ 0.76
SF3A2Q15428 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.79■□□□□ 0.76
SF3A2Q15428 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.79■□□□□ 0.76
SF3A2Q15428 AL121906.2-201ENST00000621597 723 ntBASIC19.79■□□□□ 0.76
SF3A2Q15428 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
SF3A2Q15428 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SF3A2Q15428 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SF3A2Q15428 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SF3A2Q15428 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SF3A2Q15428 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.79■□□□□ 0.76
SF3A2Q15428 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
SF3A2Q15428 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
SF3A2Q15428 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SF3A2Q15428 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SF3A2Q15428 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.78■□□□□ 0.76
SF3A2Q15428 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SF3A2Q15428 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.78■□□□□ 0.76
SF3A2Q15428 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.78■□□□□ 0.76
SF3A2Q15428 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.78■□□□□ 0.76
SF3A2Q15428 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.78■□□□□ 0.76
SF3A2Q15428 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.78■□□□□ 0.76
SF3A2Q15428 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SF3A2Q15428 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.78■□□□□ 0.76
SF3A2Q15428 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SF3A2Q15428 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SF3A2Q15428 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.78■□□□□ 0.76
SF3A2Q15428 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SF3A2Q15428 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SF3A2Q15428 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SF3A2Q15428 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SF3A2Q15428 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SF3A2Q15428 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SF3A2Q15428 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SF3A2Q15428 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SF3A2Q15428 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SF3A2Q15428 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.77■□□□□ 0.76
SF3A2Q15428 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.77■□□□□ 0.76
SF3A2Q15428 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
SF3A2Q15428 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SF3A2Q15428 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.77■□□□□ 0.76
SF3A2Q15428 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SF3A2Q15428 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SF3A2Q15428 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
SF3A2Q15428 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
SF3A2Q15428 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
SF3A2Q15428 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SF3A2Q15428 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SF3A2Q15428 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SF3A2Q15428 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.76■□□□□ 0.75
SF3A2Q15428 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SF3A2Q15428 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
SF3A2Q15428 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.76■□□□□ 0.75
SF3A2Q15428 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SF3A2Q15428 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SF3A2Q15428 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.76■□□□□ 0.75
SF3A2Q15428 KSR1P1-201ENST00000446298 240 ntBASIC19.76■□□□□ 0.75
SF3A2Q15428 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.76■□□□□ 0.75
SF3A2Q15428 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.76■□□□□ 0.75
SF3A2Q15428 AC091076.1-201ENST00000610741 619 ntBASIC19.76■□□□□ 0.75
SF3A2Q15428 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
SF3A2Q15428 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SF3A2Q15428 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SF3A2Q15428 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.76■□□□□ 0.75
SF3A2Q15428 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.76■□□□□ 0.75
SF3A2Q15428 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SF3A2Q15428 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SF3A2Q15428 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SF3A2Q15428 KRT16P1-201ENST00000399124 1418 ntBASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms