Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
IRX4P78413 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.71■□□□□ 0.91
IRX4P78413 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.71■□□□□ 0.91
IRX4P78413 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.7■□□□□ 0.9
IRX4P78413 AC121338.2-201ENST00000622535 1744 ntBASIC20.7■□□□□ 0.9
IRX4P78413 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.7■□□□□ 0.9
IRX4P78413 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
IRX4P78413 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
IRX4P78413 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
IRX4P78413 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.7■□□□□ 0.9
IRX4P78413 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
IRX4P78413 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
IRX4P78413 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
IRX4P78413 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.7■□□□□ 0.9
IRX4P78413 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.7■□□□□ 0.9
IRX4P78413 RPPH1-201ENST00000516869 333 ntBASIC20.7■□□□□ 0.9
IRX4P78413 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.7■□□□□ 0.9
IRX4P78413 MIR4497-201ENST00000583208 89 ntBASIC20.7■□□□□ 0.9
IRX4P78413 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
IRX4P78413 FAM197Y4-202ENST00000622692 608 ntBASIC20.7■□□□□ 0.9
IRX4P78413 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
IRX4P78413 AC061975.6-201ENST00000579045 1553 ntBASIC20.7■□□□□ 0.9
IRX4P78413 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
IRX4P78413 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
IRX4P78413 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
IRX4P78413 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.69■□□□□ 0.9
IRX4P78413 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
IRX4P78413 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
IRX4P78413 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.69■□□□□ 0.9
IRX4P78413 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.69■□□□□ 0.9
IRX4P78413 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.69■□□□□ 0.9
IRX4P78413 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.69■□□□□ 0.9
IRX4P78413 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
IRX4P78413 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
IRX4P78413 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.69■□□□□ 0.9
IRX4P78413 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
IRX4P78413 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
IRX4P78413 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
IRX4P78413 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
IRX4P78413 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
IRX4P78413 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
IRX4P78413 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
IRX4P78413 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
IRX4P78413 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
IRX4P78413 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
IRX4P78413 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
IRX4P78413 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.68■□□□□ 0.9
IRX4P78413 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.68■□□□□ 0.9
IRX4P78413 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.68■□□□□ 0.9
IRX4P78413 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
IRX4P78413 C1QBPP2-201ENST00000528754 825 ntBASIC20.68■□□□□ 0.9
IRX4P78413 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.68■□□□□ 0.9
IRX4P78413 AC060766.5-201ENST00000590539 871 ntBASIC20.68■□□□□ 0.9
IRX4P78413 AC073912.3-201ENST00000624414 853 ntBASIC20.68■□□□□ 0.9
IRX4P78413 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
IRX4P78413 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
IRX4P78413 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
IRX4P78413 RNF165-205ENST00000588679 2904 ntBASIC20.68■□□□□ 0.9
IRX4P78413 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
IRX4P78413 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
IRX4P78413 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.68■□□□□ 0.9
IRX4P78413 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.68■□□□□ 0.9
IRX4P78413 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
IRX4P78413 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
IRX4P78413 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
IRX4P78413 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
IRX4P78413 AC027702.1-201ENST00000563810 1770 ntBASIC20.67■□□□□ 0.9
IRX4P78413 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
IRX4P78413 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
IRX4P78413 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
IRX4P78413 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.67■□□□□ 0.9
IRX4P78413 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.67■□□□□ 0.9
IRX4P78413 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
IRX4P78413 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
IRX4P78413 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.67■□□□□ 0.9
IRX4P78413 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
IRX4P78413 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.67■□□□□ 0.9
IRX4P78413 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
IRX4P78413 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.67■□□□□ 0.9
IRX4P78413 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.67■□□□□ 0.9
IRX4P78413 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
IRX4P78413 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.67■□□□□ 0.9
IRX4P78413 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.67■□□□□ 0.9
IRX4P78413 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.67■□□□□ 0.9
IRX4P78413 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
IRX4P78413 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.67■□□□□ 0.9
IRX4P78413 AFG3L1P-217ENST00000557444 2447 ntBASIC20.67■□□□□ 0.9
IRX4P78413 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
IRX4P78413 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
IRX4P78413 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
IRX4P78413 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
IRX4P78413 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
IRX4P78413 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.66■□□□□ 0.9
IRX4P78413 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
IRX4P78413 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
IRX4P78413 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
IRX4P78413 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
IRX4P78413 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
IRX4P78413 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
IRX4P78413 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 186.5 ms