Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.13■□□□□ 0.81
PRAMEP78395 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.12■□□□□ 0.81
PRAMEP78395 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.12■□□□□ 0.81
PRAMEP78395 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PRAMEP78395 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PRAMEP78395 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
PRAMEP78395 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PRAMEP78395 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PRAMEP78395 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
PRAMEP78395 AF201337.1-201ENST00000520239 748 ntBASIC20.12■□□□□ 0.81
PRAMEP78395 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
PRAMEP78395 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
PRAMEP78395 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PRAMEP78395 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PRAMEP78395 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PRAMEP78395 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PRAMEP78395 TCF3P1-201ENST00000423021 1937 ntBASIC20.12■□□□□ 0.81
PRAMEP78395 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
PRAMEP78395 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.11■□□□□ 0.81
PRAMEP78395 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PRAMEP78395 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
PRAMEP78395 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
PRAMEP78395 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PRAMEP78395 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.11■□□□□ 0.81
PRAMEP78395 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PRAMEP78395 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PRAMEP78395 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.11■□□□□ 0.81
PRAMEP78395 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.11■□□□□ 0.81
PRAMEP78395 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.11■□□□□ 0.81
PRAMEP78395 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
PRAMEP78395 AC105036.2-201ENST00000569468 176 ntBASIC20.11■□□□□ 0.81
PRAMEP78395 AL050303.2-201ENST00000619798 666 ntBASIC20.11■□□□□ 0.81
PRAMEP78395 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.11■□□□□ 0.81
PRAMEP78395 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PRAMEP78395 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PRAMEP78395 MKRN4P-201ENST00000444706 1521 ntBASIC20.11■□□□□ 0.81
PRAMEP78395 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PRAMEP78395 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.11■□□□□ 0.81
PRAMEP78395 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PRAMEP78395 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PRAMEP78395 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.1■□□□□ 0.81
PRAMEP78395 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PRAMEP78395 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.1■□□□□ 0.81
PRAMEP78395 BX119927.1-201ENST00000636596 1552 ntBASIC20.1■□□□□ 0.81
PRAMEP78395 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
PRAMEP78395 LSM12P1-201ENST00000411836 588 ntBASIC20.1■□□□□ 0.81
PRAMEP78395 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PRAMEP78395 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.1■□□□□ 0.81
PRAMEP78395 RAP2CP1-201ENST00000605103 478 ntBASIC20.1■□□□□ 0.81
PRAMEP78395 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PRAMEP78395 KRT17P1-201ENST00000399211 1546 ntBASIC20.1■□□□□ 0.81
PRAMEP78395 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
PRAMEP78395 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
PRAMEP78395 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
PRAMEP78395 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.1■□□□□ 0.81
PRAMEP78395 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PRAMEP78395 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PRAMEP78395 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.09■□□□□ 0.81
PRAMEP78395 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PRAMEP78395 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
PRAMEP78395 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PRAMEP78395 AC006970.2-201ENST00000450065 779 ntBASIC20.09■□□□□ 0.81
PRAMEP78395 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.09■□□□□ 0.81
PRAMEP78395 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.09■□□□□ 0.81
PRAMEP78395 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.09■□□□□ 0.81
PRAMEP78395 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PRAMEP78395 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PRAMEP78395 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PRAMEP78395 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PRAMEP78395 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PRAMEP78395 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
PRAMEP78395 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
PRAMEP78395 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PRAMEP78395 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.08■□□□□ 0.81
PRAMEP78395 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
PRAMEP78395 CROCCP5-201ENST00000436658 830 ntBASIC20.08■□□□□ 0.81
PRAMEP78395 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.08■□□□□ 0.81
PRAMEP78395 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.08■□□□□ 0.81
PRAMEP78395 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PRAMEP78395 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.08■□□□□ 0.8
PRAMEP78395 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
PRAMEP78395 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
PRAMEP78395 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.8
PRAMEP78395 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
PRAMEP78395 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PRAMEP78395 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PRAMEP78395 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.07■□□□□ 0.8
PRAMEP78395 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.07■□□□□ 0.8
PRAMEP78395 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.07■□□□□ 0.8
PRAMEP78395 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.07■□□□□ 0.8
PRAMEP78395 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.07■□□□□ 0.8
PRAMEP78395 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PRAMEP78395 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PRAMEP78395 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PRAMEP78395 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PRAMEP78395 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.07■□□□□ 0.8
PRAMEP78395 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PRAMEP78395 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.07■□□□□ 0.8
PRAMEP78395 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRAMEP78395 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms