Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPS4XP62701 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.05■□□□□ 0.48
RPS4XP62701 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPS4XP62701 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.05■□□□□ 0.48
RPS4XP62701 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPS4XP62701 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.05■□□□□ 0.48
RPS4XP62701 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.05■□□□□ 0.48
RPS4XP62701 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.05■□□□□ 0.48
RPS4XP62701 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.05■□□□□ 0.48
RPS4XP62701 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPS4XP62701 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.05■□□□□ 0.48
RPS4XP62701 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
RPS4XP62701 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPS4XP62701 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
RPS4XP62701 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
RPS4XP62701 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.05■□□□□ 0.48
RPS4XP62701 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.05■□□□□ 0.48
RPS4XP62701 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RPS4XP62701 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
RPS4XP62701 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.04■□□□□ 0.48
RPS4XP62701 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RPS4XP62701 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RPS4XP62701 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RPS4XP62701 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.04■□□□□ 0.48
RPS4XP62701 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RPS4XP62701 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RPS4XP62701 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RPS4XP62701 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.04■□□□□ 0.48
RPS4XP62701 OR10C1-204ENST00000622521 1039 ntBASIC18.04■□□□□ 0.48
RPS4XP62701 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RPS4XP62701 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.04■□□□□ 0.48
RPS4XP62701 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.04■□□□□ 0.48
RPS4XP62701 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.04■□□□□ 0.48
RPS4XP62701 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RPS4XP62701 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
RPS4XP62701 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RPS4XP62701 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RPS4XP62701 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.04■□□□□ 0.48
RPS4XP62701 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.03■□□□□ 0.48
RPS4XP62701 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.03■□□□□ 0.48
RPS4XP62701 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.03■□□□□ 0.48
RPS4XP62701 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.03■□□□□ 0.48
RPS4XP62701 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RPS4XP62701 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RPS4XP62701 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RPS4XP62701 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RPS4XP62701 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.03■□□□□ 0.48
RPS4XP62701 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RPS4XP62701 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.03■□□□□ 0.48
RPS4XP62701 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RPS4XP62701 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.03■□□□□ 0.48
RPS4XP62701 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RPS4XP62701 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RPS4XP62701 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RPS4XP62701 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RPS4XP62701 KRT18P68-201ENST00000392293 1000 ntBASIC18.03■□□□□ 0.48
RPS4XP62701 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.03■□□□□ 0.48
RPS4XP62701 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.03■□□□□ 0.48
RPS4XP62701 CYP2T3P-201ENST00000601990 817 ntBASIC18.03■□□□□ 0.48
RPS4XP62701 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.03■□□□□ 0.48
RPS4XP62701 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.03■□□□□ 0.48
RPS4XP62701 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.03■□□□□ 0.48
RPS4XP62701 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RPS4XP62701 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RPS4XP62701 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RPS4XP62701 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.03■□□□□ 0.48
RPS4XP62701 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RPS4XP62701 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RPS4XP62701 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RPS4XP62701 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
RPS4XP62701 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RPS4XP62701 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.02■□□□□ 0.48
RPS4XP62701 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.02■□□□□ 0.48
RPS4XP62701 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RPS4XP62701 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RPS4XP62701 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.02■□□□□ 0.48
RPS4XP62701 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RPS4XP62701 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RPS4XP62701 AC098934.4-201ENST00000564127 592 ntBASIC18.02■□□□□ 0.48
RPS4XP62701 MIR4651-201ENST00000582622 73 ntBASIC18.02■□□□□ 0.48
RPS4XP62701 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
RPS4XP62701 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RPS4XP62701 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.02■□□□□ 0.47
RPS4XP62701 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RPS4XP62701 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
RPS4XP62701 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RPS4XP62701 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.01■□□□□ 0.47
RPS4XP62701 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RPS4XP62701 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
RPS4XP62701 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RPS4XP62701 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RPS4XP62701 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RPS4XP62701 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RPS4XP62701 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
RPS4XP62701 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.01■□□□□ 0.47
RPS4XP62701 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.01■□□□□ 0.47
RPS4XP62701 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RPS4XP62701 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RPS4XP62701 MIPEPP3-201ENST00000412105 444 ntBASIC18.01■□□□□ 0.47
RPS4XP62701 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms