Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
SEC61A1P61619 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.43■□□□□ 0.38
SEC61A1P61619 AC027702.1-201ENST00000563810 1770 ntBASIC17.43■□□□□ 0.38
SEC61A1P61619 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SEC61A1P61619 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.43■□□□□ 0.38
SEC61A1P61619 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.42■□□□□ 0.38
SEC61A1P61619 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SEC61A1P61619 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SEC61A1P61619 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.42■□□□□ 0.38
SEC61A1P61619 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SEC61A1P61619 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SEC61A1P61619 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.42■□□□□ 0.38
SEC61A1P61619 TNXA-203ENST00000507684 2038 ntBASIC17.42■□□□□ 0.38
SEC61A1P61619 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SEC61A1P61619 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SEC61A1P61619 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SEC61A1P61619 KRT16P2-201ENST00000414673 1423 ntBASIC17.42■□□□□ 0.38
SEC61A1P61619 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
SEC61A1P61619 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.42■□□□□ 0.38
SEC61A1P61619 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SEC61A1P61619 AC013268.1-206ENST00000638368 961 ntBASIC17.42■□□□□ 0.38
SEC61A1P61619 AC112229.1-201ENST00000639295 961 ntBASIC17.42■□□□□ 0.38
SEC61A1P61619 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SEC61A1P61619 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SEC61A1P61619 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SEC61A1P61619 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.42■□□□□ 0.38
SEC61A1P61619 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SEC61A1P61619 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SEC61A1P61619 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SEC61A1P61619 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
SEC61A1P61619 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
SEC61A1P61619 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
SEC61A1P61619 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SEC61A1P61619 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SEC61A1P61619 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SEC61A1P61619 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.41■□□□□ 0.38
SEC61A1P61619 GPX1P1-201ENST00000388829 606 ntBASIC17.41■□□□□ 0.38
SEC61A1P61619 AL355802.2-201ENST00000402069 882 ntBASIC17.41■□□□□ 0.38
SEC61A1P61619 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.41■□□□□ 0.38
SEC61A1P61619 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.41■□□□□ 0.38
SEC61A1P61619 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SEC61A1P61619 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SEC61A1P61619 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SEC61A1P61619 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SEC61A1P61619 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SEC61A1P61619 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SEC61A1P61619 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SEC61A1P61619 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SEC61A1P61619 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SEC61A1P61619 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
SEC61A1P61619 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
SEC61A1P61619 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SEC61A1P61619 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SEC61A1P61619 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SEC61A1P61619 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SEC61A1P61619 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.41■□□□□ 0.38
SEC61A1P61619 AP000974.1-201ENST00000623909 2387 ntBASIC17.4■□□□□ 0.38
SEC61A1P61619 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SEC61A1P61619 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SEC61A1P61619 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.4■□□□□ 0.38
SEC61A1P61619 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
SEC61A1P61619 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SEC61A1P61619 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.4■□□□□ 0.38
SEC61A1P61619 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
SEC61A1P61619 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SEC61A1P61619 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SEC61A1P61619 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SEC61A1P61619 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SEC61A1P61619 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
SEC61A1P61619 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.4■□□□□ 0.38
SEC61A1P61619 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.4■□□□□ 0.38
SEC61A1P61619 AC083906.2-201ENST00000511578 360 ntBASIC17.4■□□□□ 0.38
SEC61A1P61619 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.4■□□□□ 0.38
SEC61A1P61619 AC020907.5-201ENST00000624372 1936 ntBASIC17.4■□□□□ 0.38
SEC61A1P61619 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SEC61A1P61619 AC121338.2-201ENST00000622535 1744 ntBASIC17.4■□□□□ 0.38
SEC61A1P61619 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SEC61A1P61619 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.4■□□□□ 0.38
SEC61A1P61619 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SEC61A1P61619 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SEC61A1P61619 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
SEC61A1P61619 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.4■□□□□ 0.38
SEC61A1P61619 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SEC61A1P61619 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SEC61A1P61619 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SEC61A1P61619 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.4■□□□□ 0.38
SEC61A1P61619 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SEC61A1P61619 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SEC61A1P61619 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SEC61A1P61619 AC004408.2-201ENST00000623613 2777 ntBASIC17.4■□□□□ 0.38
SEC61A1P61619 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.39■□□□□ 0.38
SEC61A1P61619 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SEC61A1P61619 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.39■□□□□ 0.38
SEC61A1P61619 AC068338.2-201ENST00000563278 1430 ntBASIC17.39■□□□□ 0.38
SEC61A1P61619 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
SEC61A1P61619 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SEC61A1P61619 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SEC61A1P61619 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.39■□□□□ 0.37
SEC61A1P61619 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.39■□□□□ 0.37
SEC61A1P61619 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms