Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.2■□□□□ 0.5
CXCR4P61073 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.2■□□□□ 0.5
CXCR4P61073 KRT8P36-201ENST00000489121 1440 ntBASIC18.2■□□□□ 0.5
CXCR4P61073 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CXCR4P61073 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CXCR4P61073 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CXCR4P61073 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CXCR4P61073 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.2■□□□□ 0.5
CXCR4P61073 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CXCR4P61073 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CXCR4P61073 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.19■□□□□ 0.5
CXCR4P61073 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.19■□□□□ 0.5
CXCR4P61073 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.19■□□□□ 0.5
CXCR4P61073 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
CXCR4P61073 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CXCR4P61073 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CXCR4P61073 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CXCR4P61073 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CXCR4P61073 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.19■□□□□ 0.5
CXCR4P61073 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.19■□□□□ 0.5
CXCR4P61073 TPRG1LP1-201ENST00000598702 760 ntBASIC18.19■□□□□ 0.5
CXCR4P61073 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.19■□□□□ 0.5
CXCR4P61073 AL032819.2-201ENST00000624543 2162 ntBASIC18.19■□□□□ 0.5
CXCR4P61073 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.19■□□□□ 0.5
CXCR4P61073 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.19■□□□□ 0.5
CXCR4P61073 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CXCR4P61073 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CXCR4P61073 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CXCR4P61073 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CXCR4P61073 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.18■□□□□ 0.5
CXCR4P61073 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.18■□□□□ 0.5
CXCR4P61073 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CXCR4P61073 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CXCR4P61073 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CXCR4P61073 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CXCR4P61073 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CXCR4P61073 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
CXCR4P61073 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CXCR4P61073 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
CXCR4P61073 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CXCR4P61073 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CXCR4P61073 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CXCR4P61073 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.18■□□□□ 0.5
CXCR4P61073 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CXCR4P61073 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CXCR4P61073 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CXCR4P61073 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CXCR4P61073 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CXCR4P61073 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CXCR4P61073 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.17■□□□□ 0.5
CXCR4P61073 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CXCR4P61073 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CXCR4P61073 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CXCR4P61073 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
CXCR4P61073 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.17■□□□□ 0.5
CXCR4P61073 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CXCR4P61073 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CXCR4P61073 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CXCR4P61073 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CXCR4P61073 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CXCR4P61073 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CXCR4P61073 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.17■□□□□ 0.5
CXCR4P61073 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CXCR4P61073 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CXCR4P61073 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CXCR4P61073 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.17■□□□□ 0.5
CXCR4P61073 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.17■□□□□ 0.5
CXCR4P61073 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CXCR4P61073 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.17■□□□□ 0.5
CXCR4P61073 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.17■□□□□ 0.5
CXCR4P61073 AL354811.1-201ENST00000610286 706 ntBASIC18.17■□□□□ 0.5
CXCR4P61073 AC110285.6-201ENST00000617652 491 ntBASIC18.17■□□□□ 0.5
CXCR4P61073 AL136967.2-201ENST00000623968 743 ntBASIC18.17■□□□□ 0.5
CXCR4P61073 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CXCR4P61073 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CXCR4P61073 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CXCR4P61073 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CXCR4P61073 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.17■□□□□ 0.5
CXCR4P61073 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.17■□□□□ 0.5
CXCR4P61073 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CXCR4P61073 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
CXCR4P61073 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.17■□□□□ 0.5
CXCR4P61073 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
CXCR4P61073 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.17■□□□□ 0.5
CXCR4P61073 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CXCR4P61073 AC009237.14-201ENST00000609975 1594 ntBASIC18.17■□□□□ 0.5
CXCR4P61073 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CXCR4P61073 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.17■□□□□ 0.5
CXCR4P61073 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.16■□□□□ 0.5
CXCR4P61073 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.16■□□□□ 0.5
CXCR4P61073 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
CXCR4P61073 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CXCR4P61073 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CXCR4P61073 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CXCR4P61073 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CXCR4P61073 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CXCR4P61073 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.16■□□□□ 0.5
CXCR4P61073 AC245052.3-201ENST00000450182 901 ntBASIC18.16■□□□□ 0.5
CXCR4P61073 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CXCR4P61073 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms