Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN12P56749 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CLDN12P56749 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.35■□□□□ 0.37
CLDN12P56749 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN12P56749 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.35■□□□□ 0.37
CLDN12P56749 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
CLDN12P56749 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.35■□□□□ 0.37
CLDN12P56749 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN12P56749 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN12P56749 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.35■□□□□ 0.37
CLDN12P56749 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN12P56749 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.35■□□□□ 0.37
CLDN12P56749 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN12P56749 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CLDN12P56749 AC096631.2-201ENST00000436136 790 ntBASIC17.35■□□□□ 0.37
CLDN12P56749 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.35■□□□□ 0.37
CLDN12P56749 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.35■□□□□ 0.37
CLDN12P56749 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CLDN12P56749 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC17.35■□□□□ 0.37
CLDN12P56749 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CLDN12P56749 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.35■□□□□ 0.37
CLDN12P56749 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
CLDN12P56749 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.35■□□□□ 0.37
CLDN12P56749 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CLDN12P56749 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.35■□□□□ 0.37
CLDN12P56749 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN12P56749 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.35■□□□□ 0.37
CLDN12P56749 AC093503.3-201ENST00000624917 2352 ntBASIC17.35■□□□□ 0.37
CLDN12P56749 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN12P56749 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN12P56749 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN12P56749 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CLDN12P56749 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CLDN12P56749 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN12P56749 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC17.34■□□□□ 0.37
CLDN12P56749 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.34■□□□□ 0.37
CLDN12P56749 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CLDN12P56749 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC17.34■□□□□ 0.37
CLDN12P56749 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN12P56749 RASA4CP-201ENST00000424092 1398 ntBASIC17.34■□□□□ 0.37
CLDN12P56749 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN12P56749 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
CLDN12P56749 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17.34■□□□□ 0.37
CLDN12P56749 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN12P56749 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CLDN12P56749 SLC7A5P2-201ENST00000553010 536 ntBASIC17.34■□□□□ 0.37
CLDN12P56749 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC17.34■□□□□ 0.37
CLDN12P56749 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC17.34■□□□□ 0.37
CLDN12P56749 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CLDN12P56749 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17.34■□□□□ 0.37
CLDN12P56749 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.34■□□□□ 0.37
CLDN12P56749 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
CLDN12P56749 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.33■□□□□ 0.37
CLDN12P56749 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLDN12P56749 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLDN12P56749 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLDN12P56749 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CLDN12P56749 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLDN12P56749 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.33■□□□□ 0.37
CLDN12P56749 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLDN12P56749 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLDN12P56749 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLDN12P56749 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CLDN12P56749 NEFHP1-201ENST00000412845 2629 ntBASIC17.33■□□□□ 0.36
CLDN12P56749 EBPL-204ENST00000378272 766 ntTSL 3 BASIC17.33■□□□□ 0.36
CLDN12P56749 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC17.33■□□□□ 0.36
CLDN12P56749 AF213884.3-201ENST00000563833 479 ntBASIC17.33■□□□□ 0.36
CLDN12P56749 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN12P56749 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
CLDN12P56749 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN12P56749 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.33■□□□□ 0.36
CLDN12P56749 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CLDN12P56749 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.33■□□□□ 0.36
CLDN12P56749 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.33■□□□□ 0.36
CLDN12P56749 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CLDN12P56749 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN12P56749 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN12P56749 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN12P56749 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN12P56749 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CLDN12P56749 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN12P56749 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CLDN12P56749 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN12P56749 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CLDN12P56749 MTURN-203ENST00000409688 843 ntTSL 2 BASIC17.32■□□□□ 0.36
CLDN12P56749 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC17.32■□□□□ 0.36
CLDN12P56749 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN12P56749 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC17.32■□□□□ 0.36
CLDN12P56749 MIR6084-201ENST00000622012 110 ntBASIC17.32■□□□□ 0.36
CLDN12P56749 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.32■□□□□ 0.36
CLDN12P56749 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.32■□□□□ 0.36
CLDN12P56749 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN12P56749 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN12P56749 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.32■□□□□ 0.36
CLDN12P56749 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN12P56749 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN12P56749 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN12P56749 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN12P56749 Z82202.1-201ENST00000623446 1880 ntBASIC17.31■□□□□ 0.36
CLDN12P56749 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms