Protein–RNA interactions for Protein: P53947

YNL058C, Vacuolar membrane protein YNL058C, yeastyeast

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL058CP53947 tH(GUG)E1tH(GUG)E1 72 nt1.24□□□□□ -2.21
YNL058CP53947 tH(GUG)E2tH(GUG)E2 72 nt1.24□□□□□ -2.21
YNL058CP53947 tH(GUG)G1tH(GUG)G1 72 nt1.24□□□□□ -2.21
YNL058CP53947 tH(GUG)G2tH(GUG)G2 72 nt1.24□□□□□ -2.21
YNL058CP53947 tH(GUG)HtH(GUG)H 72 nt1.24□□□□□ -2.21
YNL058CP53947 tH(GUG)KtH(GUG)K 72 nt1.24□□□□□ -2.21
YNL058CP53947 tH(GUG)MtH(GUG)M 72 nt1.24□□□□□ -2.21
YNL058CP53947 YBL039C-AYBL039C-A 84 nt1.24□□□□□ -2.21
YNL058CP53947 YBR200W-AYBR200W-A 165 nt1.24□□□□□ -2.21
YNL058CP53947 snR48snR48 113 nt1.24□□□□□ -2.21
YNL058CP53947 SMC1YFL008W 3678 nt1.23□□□□□ -2.21
YNL058CP53947 YLR041WYLR041W 321 nt1.23□□□□□ -2.21
YNL058CP53947 UBP3YER151C 2739 nt1.23□□□□□ -2.21
YNL058CP53947 snR190snR190 190 nt1.22□□□□□ -2.21
YNL058CP53947 NUP145YGL092W 3954 nt1.21□□□□□ -2.22
YNL058CP53947 YIL071W-AYIL071W-A 477 nt1.2□□□□□ -2.22
YNL058CP53947 FYV10YIL097W 1551 nt1.19□□□□□ -2.22
YNL058CP53947 snR39BsnR39B 96 nt1.19□□□□□ -2.22
YNL058CP53947 KAP120YPL125W 3099 nt1.18□□□□□ -2.22
YNL058CP53947 TAH1YCR060W 336 nt1.18□□□□□ -2.22
YNL058CP53947 Q0143Q0143 153 nt1.18□□□□□ -2.22
YNL058CP53947 YJR029WYJR029W 5268 nt1.17□□□□□ -2.22
YNL058CP53947 YPR137C-BYPR137C-B 5268 nt1.17□□□□□ -2.22
YNL058CP53947 YOR329W-AYOR329W-A 210 nt1.17□□□□□ -2.22
YNL058CP53947 YML002WYML002W 2214 nt1.17□□□□□ -2.22
YNL058CP53947 BEM2YER155C 6504 nt1.16□□□□□ -2.22
YNL058CP53947 SNU13YEL026W 381 nt1.16□□□□□ -2.22
YNL058CP53947 RPL26BYGR034W 384 nt1.16□□□□□ -2.22
YNL058CP53947 tN(GUU)QtN(GUU)Q 71 nt1.16□□□□□ -2.22
YNL058CP53947 SIP4YJL089W 2490 nt1.15□□□□□ -2.22
YNL058CP53947 RKR1YMR247C 4689 nt1.15□□□□□ -2.22
YNL058CP53947 VAM6YDL077C 3150 nt1.15□□□□□ -2.22
YNL058CP53947 YCL001W-BYCL001W-B 255 nt1.15□□□□□ -2.23
YNL058CP53947 YDR544CYDR544C 429 nt1.14□□□□□ -2.23
YNL058CP53947 UTP8YGR128C 2142 nt1.14□□□□□ -2.23
YNL058CP53947 YOR314W-AYOR314W-A 111 nt1.14□□□□□ -2.23
YNL058CP53947 CHS6YJL099W 2241 nt1.13□□□□□ -2.23
YNL058CP53947 YGR130CYGR130C 2451 nt1.13□□□□□ -2.23
YNL058CP53947 tV(UAC)BtV(UAC)B 74 nt1.13□□□□□ -2.23
YNL058CP53947 tV(UAC)DtV(UAC)D 74 nt1.13□□□□□ -2.23
YNL058CP53947 ANS1YHR126C 480 nt1.12□□□□□ -2.23
YNL058CP53947 YKL100W-AYKL100W-A 90 nt1.11□□□□□ -2.23
YNL058CP53947 YPR160W-AYPR160W-A 81 nt1.11□□□□□ -2.23
YNL058CP53947 DOP1YDR141C 5097 nt1.11□□□□□ -2.23
YNL058CP53947 COG6YNL041C 2520 nt1.09□□□□□ -2.23
YNL058CP53947 PRP16YKR086W 3216 nt1.09□□□□□ -2.24
YNL058CP53947 YHR131W-AYHR131W-A 246 nt1.08□□□□□ -2.24
YNL058CP53947 SEC1YDR164C 2175 nt1.07□□□□□ -2.24
YNL058CP53947 QCR9YGR183C 201 nt1.06□□□□□ -2.24
YNL058CP53947 ROM2YLR371W 4071 nt1.06□□□□□ -2.24
YNL058CP53947 YDL073WYDL073W 2955 nt1.05□□□□□ -2.24
YNL058CP53947 YDR210WYDR210W 228 nt1.05□□□□□ -2.24
YNL058CP53947 YLR232WYLR232W 348 nt1.05□□□□□ -2.24
YNL058CP53947 SEC8YPR055W 3198 nt1.04□□□□□ -2.24
YNL058CP53947 OST4YDL232W 111 nt1.03□□□□□ -2.24
YNL058CP53947 EMT1tM(CAU)D 73 nt1.03□□□□□ -2.24
YNL058CP53947 EMT5tM(CAU)J1 73 nt1.03□□□□□ -2.24
YNL058CP53947 EMT3tM(CAU)J2 73 nt1.03□□□□□ -2.24
YNL058CP53947 EMT4tM(CAU)M 73 nt1.03□□□□□ -2.24
YNL058CP53947 EMT2tM(CAU)O2 73 nt1.03□□□□□ -2.24
YNL058CP53947 YNL205CYNL205C 423 nt1.03□□□□□ -2.24
YNL058CP53947 SCC2YDR180W 4482 nt1.03□□□□□ -2.25
YNL058CP53947 YLR399W-AYLR399W-A 105 nt1.01□□□□□ -2.25
YNL058CP53947 YNL067W-BYNL067W-B 141 nt1.01□□□□□ -2.25
YNL058CP53947 snR85snR85 171 nt0.99□□□□□ -2.25
YNL058CP53947 YCR095W-AYCR095W-A 159 nt0.97□□□□□ -2.25
YNL058CP53947 RCO1YMR075W 2055 nt0.96□□□□□ -2.26
YNL058CP53947 tM(CAU)Q2tM(CAU)Q2 78 nt0.95□□□□□ -2.26
YNL058CP53947 SOM1YEL059C-A 225 nt0.94□□□□□ -2.26
YNL058CP53947 YBR099CYBR099C 384 nt0.94□□□□□ -2.26
YNL058CP53947 NNF2YGR089W 2811 nt0.93□□□□□ -2.26
YNL058CP53947 YOR192C-BYOR192C-B 5313 nt0.9□□□□□ -2.27
YNL058CP53947 YBR072C-AYBR072C-A 162 nt0.9□□□□□ -2.27
YNL058CP53947 YJL127W-AYJL127W-A 117 nt0.89□□□□□ -2.27
YNL058CP53947 PAU24YBR301W 363 nt0.89□□□□□ -2.27
YNL058CP53947 YSP1YHR155W 3687 nt0.88□□□□□ -2.27
YNL058CP53947 BEM3YPL115C 3387 nt0.87□□□□□ -2.27
YNL058CP53947 PMP2YEL017C-A 132 nt0.86□□□□□ -2.27
YNL058CP53947 YNL103W-AYNL103W-A 90 nt0.86□□□□□ -2.27
YNL058CP53947 LTE1YAL024C 4308 nt0.86□□□□□ -2.27
YNL058CP53947 YNL054W-BYNL054W-B 5250 nt0.86□□□□□ -2.27
YNL058CP53947 YPR159C-AYPR159C-A 102 nt0.85□□□□□ -2.27
YNL058CP53947 YGR146C-AYGR146C-A 162 nt0.84□□□□□ -2.27
YNL058CP53947 YBL109WYBL109W 336 nt0.84□□□□□ -2.27
YNL058CP53947 BUL2YML111W 2763 nt0.83□□□□□ -2.28
YNL058CP53947 YPL060C-AYPL060C-A 3315 nt0.81□□□□□ -2.28
YNL058CP53947 BIR1YJR089W 2865 nt0.81□□□□□ -2.28
YNL058CP53947 GLG1YKR058W 1851 nt0.81□□□□□ -2.28
YNL058CP53947 YIL142C-AYIL142C-A 333 nt0.8□□□□□ -2.28
YNL058CP53947 YLL006W-AYLL006W-A 177 nt0.79□□□□□ -2.28
YNL058CP53947 ULP2YIL031W 3105 nt0.79□□□□□ -2.28
YNL058CP53947 YBR178WYBR178W 375 nt0.78□□□□□ -2.28
YNL058CP53947 YNL266WYNL266W 420 nt0.77□□□□□ -2.29
YNL058CP53947 NIP1YMR309C 2439 nt0.76□□□□□ -2.29
YNL058CP53947 UTP20YBL004W 7482 nt0.74□□□□□ -2.29
YNL058CP53947 RPS26AYGL189C 360 nt0.74□□□□□ -2.29
YNL058CP53947 ORC3YLL004W 1851 nt0.73□□□□□ -2.29
YNL058CP53947 TFB5YDR079C-A 219 nt0.73□□□□□ -2.29
YNL058CP53947 STF2YGR008C 255 nt0.73□□□□□ -2.29
YNL058CP53947 PAU12YGR294W 363 nt0.73□□□□□ -2.29
Retrieved 100 of 7,029 protein–RNA pairs in 10.4 ms