Protein–RNA interactions for Protein: P53088

NCS6, Cytoplasmic tRNA 2-thiolation protein 1, yeastyeast

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NCS6P53088 POL5YEL055C 3069 nt1.73□□□□□ -2.13
NCS6P53088 snR14snR14 160 nt1.73□□□□□ -2.13
NCS6P53088 MEC1YBR136W 7107 nt1.73□□□□□ -2.13
NCS6P53088 ALY2YJL084C 3141 nt1.73□□□□□ -2.13
NCS6P53088 PAN2YGL094C 3348 nt1.72□□□□□ -2.13
NCS6P53088 YHR131W-AYHR131W-A 246 nt1.72□□□□□ -2.13
NCS6P53088 YMR247W-AYMR247W-A 144 nt1.72□□□□□ -2.13
NCS6P53088 YNL284C-BYNL284C-B 5268 nt1.71□□□□□ -2.14
NCS6P53088 snR39BsnR39B 96 nt1.71□□□□□ -2.14
NCS6P53088 YML002WYML002W 2214 nt1.7□□□□□ -2.14
NCS6P53088 SEC21YNL287W 2808 nt1.68□□□□□ -2.14
NCS6P53088 tM(CAU)Q2tM(CAU)Q2 78 nt1.68□□□□□ -2.14
NCS6P53088 EAF1YDR359C 2949 nt1.67□□□□□ -2.14
NCS6P53088 tF(GAA)BtF(GAA)B 73 nt1.67□□□□□ -2.14
NCS6P53088 tF(GAA)FtF(GAA)F 73 nt1.67□□□□□ -2.14
NCS6P53088 tF(GAA)GtF(GAA)G 73 nt1.67□□□□□ -2.14
NCS6P53088 tF(GAA)H1tF(GAA)H1 73 nt1.67□□□□□ -2.14
NCS6P53088 tF(GAA)H2tF(GAA)H2 73 nt1.67□□□□□ -2.14
NCS6P53088 tF(GAA)MtF(GAA)M 73 nt1.67□□□□□ -2.14
NCS6P53088 tF(GAA)P1tF(GAA)P1 73 nt1.67□□□□□ -2.14
NCS6P53088 tF(GAA)P2tF(GAA)P2 73 nt1.67□□□□□ -2.14
NCS6P53088 SPC110YDR356W 2835 nt1.67□□□□□ -2.14
NCS6P53088 MON2YNL297C 4911 nt1.66□□□□□ -2.14
NCS6P53088 STO1YMR125W 2586 nt1.65□□□□□ -2.15
NCS6P53088 GEA2YEL022W 4380 nt1.64□□□□□ -2.15
NCS6P53088 FYV10YIL097W 1551 nt1.64□□□□□ -2.15
NCS6P53088 NOP9YJL010C 2001 nt1.63□□□□□ -2.15
NCS6P53088 WAR1YML076C 2835 nt1.62□□□□□ -2.15
NCS6P53088 SET3YKR029C 2256 nt1.61□□□□□ -2.15
NCS6P53088 YLR232WYLR232W 348 nt1.61□□□□□ -2.15
NCS6P53088 KAP122YGL016W 3246 nt1.61□□□□□ -2.15
NCS6P53088 UTP20YBL004W 7482 nt1.6□□□□□ -2.15
NCS6P53088 snR190snR190 190 nt1.6□□□□□ -2.15
NCS6P53088 DOP1YDR141C 5097 nt1.6□□□□□ -2.15
NCS6P53088 YLR041WYLR041W 321 nt1.59□□□□□ -2.15
NCS6P53088 RCO1YMR075W 2055 nt1.59□□□□□ -2.16
NCS6P53088 RPL26BYGR034W 384 nt1.58□□□□□ -2.16
NCS6P53088 YJL127W-AYJL127W-A 117 nt1.58□□□□□ -2.16
NCS6P53088 tH(GUG)E1tH(GUG)E1 72 nt1.57□□□□□ -2.16
NCS6P53088 tH(GUG)E2tH(GUG)E2 72 nt1.57□□□□□ -2.16
NCS6P53088 tH(GUG)G1tH(GUG)G1 72 nt1.57□□□□□ -2.16
NCS6P53088 tH(GUG)G2tH(GUG)G2 72 nt1.57□□□□□ -2.16
NCS6P53088 tH(GUG)HtH(GUG)H 72 nt1.57□□□□□ -2.16
NCS6P53088 tH(GUG)KtH(GUG)K 72 nt1.57□□□□□ -2.16
NCS6P53088 tH(GUG)MtH(GUG)M 72 nt1.57□□□□□ -2.16
NCS6P53088 APL3YBL037W 3078 nt1.57□□□□□ -2.16
NCS6P53088 YCS4YLR272C 3531 nt1.56□□□□□ -2.16
NCS6P53088 tV(UAC)BtV(UAC)B 74 nt1.56□□□□□ -2.16
NCS6P53088 tV(UAC)DtV(UAC)D 74 nt1.56□□□□□ -2.16
NCS6P53088 YDR210WYDR210W 228 nt1.55□□□□□ -2.16
NCS6P53088 YIL142C-AYIL142C-A 333 nt1.55□□□□□ -2.16
NCS6P53088 UBP3YER151C 2739 nt1.54□□□□□ -2.16
NCS6P53088 VPS15YBR097W 4365 nt1.54□□□□□ -2.16
NCS6P53088 MSN5YDR335W 3675 nt1.54□□□□□ -2.16
NCS6P53088 BST1YFL025C 3090 nt1.53□□□□□ -2.16
NCS6P53088 KAP120YPL125W 3099 nt1.53□□□□□ -2.16
NCS6P53088 TRM732YMR259C 4263 nt1.53□□□□□ -2.16
NCS6P53088 tS(GCU)Q1tS(GCU)Q1 86 nt1.51□□□□□ -2.17
NCS6P53088 YBR200W-AYBR200W-A 165 nt1.51□□□□□ -2.17
NCS6P53088 RAD9YDR217C 3930 nt1.5□□□□□ -2.17
NCS6P53088 HKR1YDR420W 5409 nt1.5□□□□□ -2.17
NCS6P53088 SWI4YER111C 3282 nt1.49□□□□□ -2.17
NCS6P53088 BIR1YJR089W 2865 nt1.49□□□□□ -2.17
NCS6P53088 snR81snR81 201 nt1.49□□□□□ -2.17
NCS6P53088 YNL266WYNL266W 420 nt1.49□□□□□ -2.17
NCS6P53088 COG6YNL041C 2520 nt1.49□□□□□ -2.17
NCS6P53088 ASE1YOR058C 2658 nt1.47□□□□□ -2.17
NCS6P53088 PRP16YKR086W 3216 nt1.47□□□□□ -2.17
NCS6P53088 ROM2YLR371W 4071 nt1.47□□□□□ -2.17
NCS6P53088 YGR146C-AYGR146C-A 162 nt1.47□□□□□ -2.17
NCS6P53088 YOL014WYOL014W 375 nt1.47□□□□□ -2.17
NCS6P53088 NUP188YML103C 4968 nt1.47□□□□□ -2.17
NCS6P53088 BEM3YPL115C 3387 nt1.46□□□□□ -2.18
NCS6P53088 tQ(UUG)E2tQ(UUG)E2 72 nt1.46□□□□□ -2.18
NCS6P53088 YLL066W-BYLL066W-B 171 nt1.46□□□□□ -2.18
NCS6P53088 AZF1YOR113W 2745 nt1.46□□□□□ -2.18
NCS6P53088 SEC1YDR164C 2175 nt1.45□□□□□ -2.18
NCS6P53088 YBR072C-AYBR072C-A 162 nt1.45□□□□□ -2.18
NCS6P53088 IRA1YBR140C 9279 nt1.44□□□□□ -2.18
NCS6P53088 EST2YLR318W 2655 nt1.44□□□□□ -2.18
NCS6P53088 SIP4YJL089W 2490 nt1.43□□□□□ -2.18
NCS6P53088 YAL037C-AYAL037C-A 93 nt1.43□□□□□ -2.18
NCS6P53088 NST1YNL091W 3723 nt1.42□□□□□ -2.18
NCS6P53088 YDL073WYDL073W 2955 nt1.42□□□□□ -2.18
NCS6P53088 snR45snR45 172 nt1.42□□□□□ -2.18
NCS6P53088 CDC25YLR310C 4770 nt1.42□□□□□ -2.18
NCS6P53088 SEC8YPR055W 3198 nt1.42□□□□□ -2.18
NCS6P53088 SEC3YER008C 4011 nt1.39□□□□□ -2.19
NCS6P53088 tN(GUU)QtN(GUU)Q 71 nt1.39□□□□□ -2.19
NCS6P53088 YOL083C-AYOL083C-A 141 nt1.38□□□□□ -2.19
NCS6P53088 YLR399W-AYLR399W-A 105 nt1.37□□□□□ -2.19
NCS6P53088 CDC39YCR093W 6327 nt1.36□□□□□ -2.19
NCS6P53088 YPR160W-AYPR160W-A 81 nt1.35□□□□□ -2.19
NCS6P53088 PET127YOR017W 2403 nt1.34□□□□□ -2.19
NCS6P53088 YBR196C-AYBR196C-A 150 nt1.34□□□□□ -2.19
NCS6P53088 snR62snR62 100 nt1.32□□□□□ -2.2
NCS6P53088 YSP1YHR155W 3687 nt1.3□□□□□ -2.2
NCS6P53088 YBL071C-BYBL071C-B 99 nt1.3□□□□□ -2.2
NCS6P53088 SEC10YLR166C 2616 nt1.28□□□□□ -2.2
NCS6P53088 NNF2YGR089W 2811 nt1.27□□□□□ -2.21
Retrieved 100 of 7,029 protein–RNA pairs in 7.7 ms