Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.36■□□□□ 0.53
SSR4P51571 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.36■□□□□ 0.53
SSR4P51571 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSR4P51571 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSR4P51571 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSR4P51571 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SSR4P51571 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SSR4P51571 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.35■□□□□ 0.53
SSR4P51571 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SSR4P51571 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SSR4P51571 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSR4P51571 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSR4P51571 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SSR4P51571 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.35■□□□□ 0.53
SSR4P51571 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.35■□□□□ 0.53
SSR4P51571 AC133681.1-201ENST00000465482 601 ntBASIC18.35■□□□□ 0.53
SSR4P51571 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
SSR4P51571 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.35■□□□□ 0.53
SSR4P51571 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SSR4P51571 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SSR4P51571 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SSR4P51571 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SSR4P51571 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SSR4P51571 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SSR4P51571 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSR4P51571 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSR4P51571 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SSR4P51571 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SSR4P51571 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSR4P51571 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSR4P51571 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SSR4P51571 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSR4P51571 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
SSR4P51571 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.34■□□□□ 0.53
SSR4P51571 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSR4P51571 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSR4P51571 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SSR4P51571 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SSR4P51571 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.34■□□□□ 0.53
SSR4P51571 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.34■□□□□ 0.53
SSR4P51571 AC110285.5-201ENST00000611501 352 ntBASIC18.34■□□□□ 0.53
SSR4P51571 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SSR4P51571 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SSR4P51571 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSR4P51571 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
SSR4P51571 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.34■□□□□ 0.53
SSR4P51571 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SSR4P51571 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.34■□□□□ 0.53
SSR4P51571 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SSR4P51571 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SSR4P51571 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SSR4P51571 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.33■□□□□ 0.53
SSR4P51571 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SSR4P51571 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SSR4P51571 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SSR4P51571 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SSR4P51571 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.33■□□□□ 0.52
SSR4P51571 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.33■□□□□ 0.52
SSR4P51571 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SSR4P51571 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.33■□□□□ 0.52
SSR4P51571 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.33■□□□□ 0.52
SSR4P51571 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SSR4P51571 RPS2P4-201ENST00000476944 856 ntBASIC18.33■□□□□ 0.52
SSR4P51571 AC008550.1-201ENST00000511500 884 ntBASIC18.33■□□□□ 0.52
SSR4P51571 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.33■□□□□ 0.52
SSR4P51571 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SSR4P51571 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.33■□□□□ 0.52
SSR4P51571 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.33■□□□□ 0.52
SSR4P51571 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SSR4P51571 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.33■□□□□ 0.52
SSR4P51571 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.33■□□□□ 0.52
SSR4P51571 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.33■□□□□ 0.52
SSR4P51571 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SSR4P51571 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.33■□□□□ 0.52
SSR4P51571 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SSR4P51571 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
SSR4P51571 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SSR4P51571 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SSR4P51571 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.33■□□□□ 0.52
SSR4P51571 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSR4P51571 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSR4P51571 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.32■□□□□ 0.52
SSR4P51571 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSR4P51571 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SSR4P51571 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SSR4P51571 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SSR4P51571 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSR4P51571 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SSR4P51571 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
SSR4P51571 MIR718-201ENST00000390190 70 ntBASIC18.32■□□□□ 0.52
SSR4P51571 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSR4P51571 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.32■□□□□ 0.52
SSR4P51571 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.32■□□□□ 0.52
SSR4P51571 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSR4P51571 SMG8-203ENST00000578922 2178 ntBASIC18.32■□□□□ 0.52
SSR4P51571 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSR4P51571 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.32■□□□□ 0.52
SSR4P51571 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SSR4P51571 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SSR4P51571 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms