Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.55■□□□□ 0.56
RNF144AP50876 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
RNF144AP50876 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF144AP50876 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RNF144AP50876 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF144AP50876 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF144AP50876 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.55■□□□□ 0.56
RNF144AP50876 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
RNF144AP50876 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF144AP50876 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
RNF144AP50876 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.54■□□□□ 0.56
RNF144AP50876 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF144AP50876 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RNF144AP50876 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF144AP50876 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.54■□□□□ 0.56
RNF144AP50876 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.54■□□□□ 0.56
RNF144AP50876 AC083906.2-201ENST00000511578 360 ntBASIC18.54■□□□□ 0.56
RNF144AP50876 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
RNF144AP50876 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.54■□□□□ 0.56
RNF144AP50876 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.54■□□□□ 0.56
RNF144AP50876 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.54■□□□□ 0.56
RNF144AP50876 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.54■□□□□ 0.56
RNF144AP50876 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RNF144AP50876 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF144AP50876 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RNF144AP50876 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF144AP50876 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF144AP50876 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.53■□□□□ 0.56
RNF144AP50876 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RNF144AP50876 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.53■□□□□ 0.56
RNF144AP50876 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.53■□□□□ 0.56
RNF144AP50876 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF144AP50876 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.53■□□□□ 0.56
RNF144AP50876 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RNF144AP50876 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF144AP50876 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF144AP50876 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RNF144AP50876 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RNF144AP50876 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
RNF144AP50876 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
RNF144AP50876 AC090192.1-201ENST00000517740 490 ntBASIC18.53■□□□□ 0.56
RNF144AP50876 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
RNF144AP50876 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.53■□□□□ 0.56
RNF144AP50876 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RNF144AP50876 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.53■□□□□ 0.56
RNF144AP50876 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RNF144AP50876 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.53■□□□□ 0.56
RNF144AP50876 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF144AP50876 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
RNF144AP50876 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.53■□□□□ 0.56
RNF144AP50876 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
RNF144AP50876 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
RNF144AP50876 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.52■□□□□ 0.56
RNF144AP50876 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
RNF144AP50876 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF144AP50876 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF144AP50876 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF144AP50876 LSM12P1-201ENST00000411836 588 ntBASIC18.52■□□□□ 0.56
RNF144AP50876 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF144AP50876 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.52■□□□□ 0.56
RNF144AP50876 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.52■□□□□ 0.56
RNF144AP50876 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.52■□□□□ 0.56
RNF144AP50876 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.52■□□□□ 0.56
RNF144AP50876 AC133552.2-202ENST00000575694 574 ntBASIC18.52■□□□□ 0.56
RNF144AP50876 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.52■□□□□ 0.56
RNF144AP50876 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.52■□□□□ 0.56
RNF144AP50876 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.52■□□□□ 0.56
RNF144AP50876 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.52■□□□□ 0.56
RNF144AP50876 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.52■□□□□ 0.56
RNF144AP50876 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.52■□□□□ 0.56
RNF144AP50876 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF144AP50876 TCF3P1-201ENST00000423021 1937 ntBASIC18.52■□□□□ 0.56
RNF144AP50876 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.52■□□□□ 0.55
RNF144AP50876 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
RNF144AP50876 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
RNF144AP50876 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF144AP50876 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF144AP50876 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.51■□□□□ 0.55
RNF144AP50876 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF144AP50876 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF144AP50876 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF144AP50876 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF144AP50876 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF144AP50876 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF144AP50876 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF144AP50876 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.51■□□□□ 0.55
RNF144AP50876 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF144AP50876 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.51■□□□□ 0.55
RNF144AP50876 AC098934.4-201ENST00000564127 592 ntBASIC18.51■□□□□ 0.55
RNF144AP50876 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.51■□□□□ 0.55
RNF144AP50876 AC100791.3-201ENST00000617619 330 ntBASIC18.51■□□□□ 0.55
RNF144AP50876 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.51■□□□□ 0.55
RNF144AP50876 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF144AP50876 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF144AP50876 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.51■□□□□ 0.55
RNF144AP50876 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
RNF144AP50876 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF144AP50876 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RNF144AP50876 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF144AP50876 AL691432.2-201ENST00000607222 2038 ntBASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms