Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PRIM2P49643 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PRIM2P49643 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.96■□□□□ 0.63
PRIM2P49643 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
PRIM2P49643 DPP3P2-201ENST00000416030 1696 ntBASIC18.96■□□□□ 0.63
PRIM2P49643 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PRIM2P49643 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PRIM2P49643 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
PRIM2P49643 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
PRIM2P49643 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.96■□□□□ 0.63
PRIM2P49643 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PRIM2P49643 AC231657.2-201ENST00000624556 255 ntBASIC18.96■□□□□ 0.63
PRIM2P49643 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.96■□□□□ 0.63
PRIM2P49643 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.96■□□□□ 0.63
PRIM2P49643 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PRIM2P49643 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
PRIM2P49643 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
PRIM2P49643 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PRIM2P49643 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.96■□□□□ 0.63
PRIM2P49643 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
PRIM2P49643 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PRIM2P49643 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PRIM2P49643 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PRIM2P49643 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PRIM2P49643 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.95■□□□□ 0.62
PRIM2P49643 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.95■□□□□ 0.62
PRIM2P49643 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PRIM2P49643 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.95■□□□□ 0.62
PRIM2P49643 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.95■□□□□ 0.62
PRIM2P49643 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.95■□□□□ 0.62
PRIM2P49643 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
PRIM2P49643 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.95■□□□□ 0.62
PRIM2P49643 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PRIM2P49643 AC087633.2-202ENST00000565166 1439 ntBASIC18.95■□□□□ 0.62
PRIM2P49643 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PRIM2P49643 CNN2P6-201ENST00000439038 900 ntBASIC18.95■□□□□ 0.62
PRIM2P49643 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
PRIM2P49643 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.95■□□□□ 0.62
PRIM2P49643 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.95■□□□□ 0.62
PRIM2P49643 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.95■□□□□ 0.62
PRIM2P49643 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PRIM2P49643 AC016405.3-201ENST00000607710 860 ntBASIC18.95■□□□□ 0.62
PRIM2P49643 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.95■□□□□ 0.62
PRIM2P49643 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
PRIM2P49643 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PRIM2P49643 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PRIM2P49643 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PRIM2P49643 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PRIM2P49643 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
PRIM2P49643 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.95■□□□□ 0.62
PRIM2P49643 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.95■□□□□ 0.62
PRIM2P49643 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PRIM2P49643 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PRIM2P49643 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PRIM2P49643 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.94■□□□□ 0.62
PRIM2P49643 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRIM2P49643 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRIM2P49643 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.94■□□□□ 0.62
PRIM2P49643 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.94■□□□□ 0.62
PRIM2P49643 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRIM2P49643 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRIM2P49643 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PRIM2P49643 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.94■□□□□ 0.62
PRIM2P49643 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRIM2P49643 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
PRIM2P49643 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRIM2P49643 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRIM2P49643 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRIM2P49643 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.94■□□□□ 0.62
PRIM2P49643 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PRIM2P49643 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.94■□□□□ 0.62
PRIM2P49643 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.94■□□□□ 0.62
PRIM2P49643 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.94■□□□□ 0.62
PRIM2P49643 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.94■□□□□ 0.62
PRIM2P49643 IKBKGP1-201ENST00000612193 1073 ntBASIC18.94■□□□□ 0.62
PRIM2P49643 AL356652.1-201ENST00000615962 565 ntBASIC18.94■□□□□ 0.62
PRIM2P49643 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.94■□□□□ 0.62
PRIM2P49643 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.94■□□□□ 0.62
PRIM2P49643 CYP21A1P-202ENST00000354927 1481 ntBASIC18.94■□□□□ 0.62
PRIM2P49643 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRIM2P49643 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.94■□□□□ 0.62
PRIM2P49643 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRIM2P49643 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.94■□□□□ 0.62
PRIM2P49643 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
PRIM2P49643 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRIM2P49643 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.93■□□□□ 0.62
PRIM2P49643 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.93■□□□□ 0.62
PRIM2P49643 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
PRIM2P49643 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRIM2P49643 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.93■□□□□ 0.62
PRIM2P49643 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PRIM2P49643 AC068338.2-201ENST00000563278 1430 ntBASIC18.93■□□□□ 0.62
PRIM2P49643 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
PRIM2P49643 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRIM2P49643 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.93■□□□□ 0.62
PRIM2P49643 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRIM2P49643 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PRIM2P49643 AC007322.1-201ENST00000426983 750 ntBASIC18.93■□□□□ 0.62
PRIM2P49643 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRIM2P49643 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms