Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.98■□□□□ 0.63
GABRA4P48169 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.98■□□□□ 0.63
GABRA4P48169 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.98■□□□□ 0.63
GABRA4P48169 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
GABRA4P48169 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GABRA4P48169 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.98■□□□□ 0.63
GABRA4P48169 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
GABRA4P48169 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
GABRA4P48169 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.98■□□□□ 0.63
GABRA4P48169 PRKY-204ENST00000533551 1019 ntBASIC18.98■□□□□ 0.63
GABRA4P48169 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.98■□□□□ 0.63
GABRA4P48169 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
GABRA4P48169 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.98■□□□□ 0.63
GABRA4P48169 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.98■□□□□ 0.63
GABRA4P48169 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.98■□□□□ 0.63
GABRA4P48169 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
GABRA4P48169 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GABRA4P48169 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GABRA4P48169 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
GABRA4P48169 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
GABRA4P48169 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GABRA4P48169 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
GABRA4P48169 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
GABRA4P48169 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
GABRA4P48169 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
GABRA4P48169 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GABRA4P48169 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GABRA4P48169 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GABRA4P48169 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.97■□□□□ 0.63
GABRA4P48169 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
GABRA4P48169 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.97■□□□□ 0.63
GABRA4P48169 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.97■□□□□ 0.63
GABRA4P48169 RPS2P4-201ENST00000476944 856 ntBASIC18.97■□□□□ 0.63
GABRA4P48169 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.97■□□□□ 0.63
GABRA4P48169 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.97■□□□□ 0.63
GABRA4P48169 Z99916.2-201ENST00000604037 246 ntBASIC18.97■□□□□ 0.63
GABRA4P48169 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.97■□□□□ 0.63
GABRA4P48169 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
GABRA4P48169 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
GABRA4P48169 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
GABRA4P48169 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.97■□□□□ 0.63
GABRA4P48169 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
GABRA4P48169 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GABRA4P48169 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GABRA4P48169 AP005212.1-201ENST00000581547 1997 ntBASIC18.97■□□□□ 0.63
GABRA4P48169 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
GABRA4P48169 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
GABRA4P48169 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
GABRA4P48169 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.96■□□□□ 0.63
GABRA4P48169 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
GABRA4P48169 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.96■□□□□ 0.63
GABRA4P48169 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
GABRA4P48169 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
GABRA4P48169 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.96■□□□□ 0.63
GABRA4P48169 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GABRA4P48169 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.96■□□□□ 0.63
GABRA4P48169 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.96■□□□□ 0.63
GABRA4P48169 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.96■□□□□ 0.63
GABRA4P48169 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.96■□□□□ 0.63
GABRA4P48169 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GABRA4P48169 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
GABRA4P48169 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.96■□□□□ 0.63
GABRA4P48169 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.96■□□□□ 0.63
GABRA4P48169 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
GABRA4P48169 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.95■□□□□ 0.62
GABRA4P48169 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
GABRA4P48169 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
GABRA4P48169 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GABRA4P48169 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
GABRA4P48169 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GABRA4P48169 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
GABRA4P48169 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
GABRA4P48169 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
GABRA4P48169 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
GABRA4P48169 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
GABRA4P48169 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
GABRA4P48169 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
GABRA4P48169 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
GABRA4P48169 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GABRA4P48169 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
GABRA4P48169 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
GABRA4P48169 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GABRA4P48169 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.94■□□□□ 0.62
GABRA4P48169 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GABRA4P48169 KRT16P6-202ENST00000425692 1426 ntBASIC18.94■□□□□ 0.62
GABRA4P48169 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GABRA4P48169 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GABRA4P48169 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.94■□□□□ 0.62
GABRA4P48169 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.94■□□□□ 0.62
GABRA4P48169 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
GABRA4P48169 AL596275.1-201ENST00000423464 877 ntBASIC18.94■□□□□ 0.62
GABRA4P48169 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
GABRA4P48169 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
GABRA4P48169 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.94■□□□□ 0.62
GABRA4P48169 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.94■□□□□ 0.62
GABRA4P48169 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
GABRA4P48169 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.94■□□□□ 0.62
GABRA4P48169 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.94■□□□□ 0.62
GABRA4P48169 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
GABRA4P48169 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms