Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.76■□□□□ 0.91
MMP13P45452 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.76■□□□□ 0.91
MMP13P45452 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.76■□□□□ 0.91
MMP13P45452 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
MMP13P45452 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.76■□□□□ 0.91
MMP13P45452 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MMP13P45452 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
MMP13P45452 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
MMP13P45452 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MMP13P45452 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.76■□□□□ 0.91
MMP13P45452 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.76■□□□□ 0.91
MMP13P45452 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.76■□□□□ 0.91
MMP13P45452 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.76■□□□□ 0.91
MMP13P45452 AL121832.2-201ENST00000610979 668 ntBASIC20.76■□□□□ 0.91
MMP13P45452 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MMP13P45452 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
MMP13P45452 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
MMP13P45452 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
MMP13P45452 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MMP13P45452 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
MMP13P45452 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MMP13P45452 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
MMP13P45452 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MMP13P45452 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.75■□□□□ 0.91
MMP13P45452 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.75■□□□□ 0.91
MMP13P45452 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.75■□□□□ 0.91
MMP13P45452 CYP2T3P-201ENST00000601990 817 ntBASIC20.75■□□□□ 0.91
MMP13P45452 AL356652.1-201ENST00000615962 565 ntBASIC20.75■□□□□ 0.91
MMP13P45452 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MMP13P45452 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
MMP13P45452 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MMP13P45452 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MMP13P45452 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
MMP13P45452 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
MMP13P45452 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MMP13P45452 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.75■□□□□ 0.91
MMP13P45452 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MMP13P45452 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.74■□□□□ 0.91
MMP13P45452 MKRN4P-201ENST00000444706 1521 ntBASIC20.74■□□□□ 0.91
MMP13P45452 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
MMP13P45452 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.74■□□□□ 0.91
MMP13P45452 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.74■□□□□ 0.91
MMP13P45452 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MMP13P45452 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MMP13P45452 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
MMP13P45452 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.74■□□□□ 0.91
MMP13P45452 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.74■□□□□ 0.91
MMP13P45452 AL355472.2-201ENST00000422958 438 ntBASIC20.74■□□□□ 0.91
MMP13P45452 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MMP13P45452 NCF1B-203ENST00000435988 1254 ntBASIC20.74■□□□□ 0.91
MMP13P45452 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.74■□□□□ 0.91
MMP13P45452 KRT8P36-201ENST00000489121 1440 ntBASIC20.74■□□□□ 0.91
MMP13P45452 AC083906.2-201ENST00000511578 360 ntBASIC20.74■□□□□ 0.91
MMP13P45452 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
MMP13P45452 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.74■□□□□ 0.91
MMP13P45452 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.74■□□□□ 0.91
MMP13P45452 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.74■□□□□ 0.91
MMP13P45452 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
MMP13P45452 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MMP13P45452 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MMP13P45452 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
MMP13P45452 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.74■□□□□ 0.91
MMP13P45452 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MMP13P45452 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
MMP13P45452 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.74■□□□□ 0.91
MMP13P45452 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MMP13P45452 AC092720.2-201ENST00000602388 1665 ntBASIC20.73■□□□□ 0.91
MMP13P45452 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
MMP13P45452 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.73■□□□□ 0.91
MMP13P45452 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
MMP13P45452 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
MMP13P45452 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MMP13P45452 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
MMP13P45452 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.73■□□□□ 0.91
MMP13P45452 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.73■□□□□ 0.91
MMP13P45452 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.73■□□□□ 0.91
MMP13P45452 KRT18P68-201ENST00000392293 1000 ntBASIC20.73■□□□□ 0.91
MMP13P45452 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.73■□□□□ 0.91
MMP13P45452 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.73■□□□□ 0.91
MMP13P45452 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.73■□□□□ 0.91
MMP13P45452 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
MMP13P45452 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.73■□□□□ 0.91
MMP13P45452 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.73■□□□□ 0.91
MMP13P45452 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.73■□□□□ 0.91
MMP13P45452 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
MMP13P45452 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MMP13P45452 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
MMP13P45452 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.73■□□□□ 0.91
MMP13P45452 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MMP13P45452 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.72■□□□□ 0.91
MMP13P45452 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
MMP13P45452 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MMP13P45452 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MMP13P45452 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MMP13P45452 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.72■□□□□ 0.91
MMP13P45452 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MMP13P45452 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MMP13P45452 GPX1P1-201ENST00000388829 606 ntBASIC20.72■□□□□ 0.91
MMP13P45452 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.72■□□□□ 0.91
MMP13P45452 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms