Protein–RNA interactions for Protein: P43593

UBP6, Ubiquitin carboxyl-terminal hydrolase 6, yeastyeast

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP6P43593 YIL020C-AYIL020C-A 339 nt1.46□□□□□ -2.18
UBP6P43593 CDC31YOR257W 486 nt1.46□□□□□ -2.18
UBP6P43593 TAH1YCR060W 336 nt1.45□□□□□ -2.18
UBP6P43593 CHS6YJL099W 2241 nt1.45□□□□□ -2.18
UBP6P43593 tL(UAA)QtL(UAA)Q 85 nt1.44□□□□□ -2.18
UBP6P43593 SEC8YPR055W 3198 nt1.43□□□□□ -2.18
UBP6P43593 KAP120YPL125W 3099 nt1.4□□□□□ -2.19
UBP6P43593 SSK2YNR031C 4740 nt1.4□□□□□ -2.19
UBP6P43593 YLR232WYLR232W 348 nt1.39□□□□□ -2.19
UBP6P43593 FIG2YCR089W 4830 nt1.38□□□□□ -2.19
UBP6P43593 RAD9YDR217C 3930 nt1.37□□□□□ -2.19
UBP6P43593 Q0143Q0143 153 nt1.36□□□□□ -2.19
UBP6P43593 YLR399W-AYLR399W-A 105 nt1.36□□□□□ -2.19
UBP6P43593 YOR329W-AYOR329W-A 210 nt1.36□□□□□ -2.19
UBP6P43593 PRP16YKR086W 3216 nt1.35□□□□□ -2.19
UBP6P43593 CAT8YMR280C 4302 nt1.35□□□□□ -2.19
UBP6P43593 YPR160W-AYPR160W-A 81 nt1.34□□□□□ -2.19
UBP6P43593 YHR131W-AYHR131W-A 246 nt1.33□□□□□ -2.2
UBP6P43593 YCL001W-BYCL001W-B 255 nt1.33□□□□□ -2.2
UBP6P43593 QCR9YGR183C 201 nt1.31□□□□□ -2.2
UBP6P43593 YNL067W-BYNL067W-B 141 nt1.31□□□□□ -2.2
UBP6P43593 YDR544CYDR544C 429 nt1.29□□□□□ -2.2
UBP6P43593 tM(CAU)Q2tM(CAU)Q2 78 nt1.29□□□□□ -2.2
UBP6P43593 BEM3YPL115C 3387 nt1.28□□□□□ -2.2
UBP6P43593 tN(GUU)QtN(GUU)Q 71 nt1.27□□□□□ -2.21
UBP6P43593 OST4YDL232W 111 nt1.26□□□□□ -2.21
UBP6P43593 SPT7YBR081C 3999 nt1.25□□□□□ -2.21
UBP6P43593 YCR095W-AYCR095W-A 159 nt1.25□□□□□ -2.21
UBP6P43593 snR39BsnR39B 96 nt1.25□□□□□ -2.21
UBP6P43593 YNL284C-BYNL284C-B 5268 nt1.25□□□□□ -2.21
UBP6P43593 RPM2YML091C 3609 nt1.25□□□□□ -2.21
UBP6P43593 YSP1YHR155W 3687 nt1.25□□□□□ -2.21
UBP6P43593 tH(GUG)E1tH(GUG)E1 72 nt1.24□□□□□ -2.21
UBP6P43593 tH(GUG)E2tH(GUG)E2 72 nt1.24□□□□□ -2.21
UBP6P43593 tH(GUG)G1tH(GUG)G1 72 nt1.24□□□□□ -2.21
UBP6P43593 tH(GUG)G2tH(GUG)G2 72 nt1.24□□□□□ -2.21
UBP6P43593 tH(GUG)HtH(GUG)H 72 nt1.24□□□□□ -2.21
UBP6P43593 tH(GUG)KtH(GUG)K 72 nt1.24□□□□□ -2.21
UBP6P43593 tH(GUG)MtH(GUG)M 72 nt1.24□□□□□ -2.21
UBP6P43593 YGR130CYGR130C 2451 nt1.24□□□□□ -2.21
UBP6P43593 UBP3YER151C 2739 nt1.23□□□□□ -2.21
UBP6P43593 YDL073WYDL073W 2955 nt1.23□□□□□ -2.21
UBP6P43593 SOM1YEL059C-A 225 nt1.22□□□□□ -2.21
UBP6P43593 COG6YNL041C 2520 nt1.22□□□□□ -2.21
UBP6P43593 MSH3YCR092C 3057 nt1.21□□□□□ -2.22
UBP6P43593 snR85snR85 171 nt1.2□□□□□ -2.22
UBP6P43593 YNL205CYNL205C 423 nt1.2□□□□□ -2.22
UBP6P43593 YBR099CYBR099C 384 nt1.18□□□□□ -2.22
UBP6P43593 YDR210WYDR210W 228 nt1.17□□□□□ -2.22
UBP6P43593 YIL071W-AYIL071W-A 477 nt1.16□□□□□ -2.22
UBP6P43593 YJL127W-AYJL127W-A 117 nt1.16□□□□□ -2.22
UBP6P43593 NST1YNL091W 3723 nt1.15□□□□□ -2.23
UBP6P43593 LAA1YJL207C 6045 nt1.14□□□□□ -2.23
UBP6P43593 YGR146C-AYGR146C-A 162 nt1.14□□□□□ -2.23
UBP6P43593 VAM6YDL077C 3150 nt1.14□□□□□ -2.23
UBP6P43593 HUG1YML058W-A 207 nt1.13□□□□□ -2.23
UBP6P43593 YBR072C-AYBR072C-A 162 nt1.13□□□□□ -2.23
UBP6P43593 SCC2YDR180W 4482 nt1.13□□□□□ -2.23
UBP6P43593 SEC1YDR164C 2175 nt1.13□□□□□ -2.23
UBP6P43593 STF2YGR008C 255 nt1.12□□□□□ -2.23
UBP6P43593 tV(UAC)BtV(UAC)B 74 nt1.12□□□□□ -2.23
UBP6P43593 tV(UAC)DtV(UAC)D 74 nt1.12□□□□□ -2.23
UBP6P43593 BEM2YER155C 6504 nt1.12□□□□□ -2.23
UBP6P43593 GLG1YKR058W 1851 nt1.12□□□□□ -2.23
UBP6P43593 ULP2YIL031W 3105 nt1.11□□□□□ -2.23
UBP6P43593 YJR029WYJR029W 5268 nt1.1□□□□□ -2.23
UBP6P43593 YPR137C-BYPR137C-B 5268 nt1.1□□□□□ -2.23
UBP6P43593 IML1YJR138W 4755 nt1.08□□□□□ -2.24
UBP6P43593 RKR1YMR247C 4689 nt1.08□□□□□ -2.24
UBP6P43593 YPR117WYPR117W 7470 nt1.05□□□□□ -2.24
UBP6P43593 SIP4YJL089W 2490 nt1.05□□□□□ -2.24
UBP6P43593 YLL006W-AYLL006W-A 177 nt1.04□□□□□ -2.24
UBP6P43593 PMP2YEL017C-A 132 nt1.03□□□□□ -2.24
UBP6P43593 EMT1tM(CAU)D 73 nt1.03□□□□□ -2.24
UBP6P43593 EMT5tM(CAU)J1 73 nt1.03□□□□□ -2.24
UBP6P43593 EMT3tM(CAU)J2 73 nt1.03□□□□□ -2.24
UBP6P43593 EMT4tM(CAU)M 73 nt1.03□□□□□ -2.24
UBP6P43593 EMT2tM(CAU)O2 73 nt1.03□□□□□ -2.24
UBP6P43593 NNF2YGR089W 2811 nt1.02□□□□□ -2.25
UBP6P43593 BIR1YJR089W 2865 nt1.01□□□□□ -2.25
UBP6P43593 LTE1YAL024C 4308 nt0.98□□□□□ -2.25
UBP6P43593 BUD3YCL014W 4911 nt0.98□□□□□ -2.25
UBP6P43593 YNL103W-AYNL103W-A 90 nt0.95□□□□□ -2.26
UBP6P43593 CSE1YGL238W 2883 nt0.94□□□□□ -2.26
UBP6P43593 YNL266WYNL266W 420 nt0.94□□□□□ -2.26
UBP6P43593 MYO1YHR023W 5787 nt0.92□□□□□ -2.26
UBP6P43593 snR61snR61 90 nt0.91□□□□□ -2.26
UBP6P43593 NIP1YMR309C 2439 nt0.91□□□□□ -2.26
UBP6P43593 YOR192C-BYOR192C-B 5313 nt0.91□□□□□ -2.26
UBP6P43593 DOP1YDR141C 5097 nt0.9□□□□□ -2.26
UBP6P43593 PET111YMR257C 2403 nt0.9□□□□□ -2.26
UBP6P43593 PAU24YBR301W 363 nt0.9□□□□□ -2.27
UBP6P43593 TFB5YDR079C-A 219 nt0.89□□□□□ -2.27
UBP6P43593 BUL2YML111W 2763 nt0.89□□□□□ -2.27
UBP6P43593 RCO1YMR075W 2055 nt0.88□□□□□ -2.27
UBP6P43593 YBR178WYBR178W 375 nt0.88□□□□□ -2.27
UBP6P43593 RPS26AYGL189C 360 nt0.85□□□□□ -2.27
UBP6P43593 SEC10YLR166C 2616 nt0.85□□□□□ -2.27
UBP6P43593 YDR371C-AYDR371C-A 105 nt0.83□□□□□ -2.28
UBP6P43593 PAU12YGR294W 363 nt0.83□□□□□ -2.28
Retrieved 100 of 7,029 protein–RNA pairs in 13.7 ms