Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MTHFRP42898 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
MTHFRP42898 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MTHFRP42898 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
MTHFRP42898 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
MTHFRP42898 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
MTHFRP42898 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MTHFRP42898 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MTHFRP42898 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MTHFRP42898 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.95■□□□□ 0.94
MTHFRP42898 SLC25A3P1-201ENST00000443844 931 ntBASIC20.95■□□□□ 0.94
MTHFRP42898 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MTHFRP42898 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
MTHFRP42898 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.95■□□□□ 0.94
MTHFRP42898 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
MTHFRP42898 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
MTHFRP42898 AC010947.1-201ENST00000623454 693 ntBASIC20.95■□□□□ 0.94
MTHFRP42898 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MTHFRP42898 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MTHFRP42898 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
MTHFRP42898 KRT8P36-201ENST00000489121 1440 ntBASIC20.95■□□□□ 0.94
MTHFRP42898 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
MTHFRP42898 CYP2D8P-201ENST00000433633 1490 ntBASIC20.94■□□□□ 0.94
MTHFRP42898 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
MTHFRP42898 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MTHFRP42898 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.94■□□□□ 0.94
MTHFRP42898 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MTHFRP42898 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MTHFRP42898 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MTHFRP42898 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
MTHFRP42898 NIFKP9-201ENST00000419265 221 ntBASIC20.94■□□□□ 0.94
MTHFRP42898 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.94■□□□□ 0.94
MTHFRP42898 AL390955.1-201ENST00000428694 934 ntBASIC20.94■□□□□ 0.94
MTHFRP42898 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.94■□□□□ 0.94
MTHFRP42898 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.94■□□□□ 0.94
MTHFRP42898 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.94■□□□□ 0.94
MTHFRP42898 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MTHFRP42898 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MTHFRP42898 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
MTHFRP42898 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MTHFRP42898 KRT16P1-201ENST00000399124 1418 ntBASIC20.94■□□□□ 0.94
MTHFRP42898 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MTHFRP42898 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MTHFRP42898 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MTHFRP42898 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MTHFRP42898 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
MTHFRP42898 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.93■□□□□ 0.94
MTHFRP42898 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.93■□□□□ 0.94
MTHFRP42898 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.93■□□□□ 0.94
MTHFRP42898 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
MTHFRP42898 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MTHFRP42898 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MTHFRP42898 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MTHFRP42898 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.93■□□□□ 0.94
MTHFRP42898 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.93■□□□□ 0.94
MTHFRP42898 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.93■□□□□ 0.94
MTHFRP42898 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.93■□□□□ 0.94
MTHFRP42898 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.93■□□□□ 0.94
MTHFRP42898 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.93■□□□□ 0.94
MTHFRP42898 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.93■□□□□ 0.94
MTHFRP42898 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MTHFRP42898 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.93■□□□□ 0.94
MTHFRP42898 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.93■□□□□ 0.94
MTHFRP42898 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
MTHFRP42898 AL137060.1-201ENST00000618151 2648 ntBASIC20.93■□□□□ 0.94
MTHFRP42898 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.93■□□□□ 0.94
MTHFRP42898 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MTHFRP42898 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MTHFRP42898 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.93■□□□□ 0.94
MTHFRP42898 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
MTHFRP42898 AC073508.3-201ENST00000619697 1419 ntBASIC20.93■□□□□ 0.94
MTHFRP42898 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
MTHFRP42898 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MTHFRP42898 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MTHFRP42898 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
MTHFRP42898 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MTHFRP42898 AL024507.2-201ENST00000606070 2574 ntBASIC20.92■□□□□ 0.94
MTHFRP42898 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
MTHFRP42898 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
MTHFRP42898 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.92■□□□□ 0.94
MTHFRP42898 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MTHFRP42898 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MTHFRP42898 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
MTHFRP42898 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MTHFRP42898 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.92■□□□□ 0.94
MTHFRP42898 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20.92■□□□□ 0.94
MTHFRP42898 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.92■□□□□ 0.94
MTHFRP42898 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
MTHFRP42898 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.92■□□□□ 0.94
MTHFRP42898 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.92■□□□□ 0.94
MTHFRP42898 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.92■□□□□ 0.94
MTHFRP42898 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
MTHFRP42898 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
MTHFRP42898 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
MTHFRP42898 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.92■□□□□ 0.94
MTHFRP42898 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
MTHFRP42898 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.91■□□□□ 0.94
MTHFRP42898 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
MTHFRP42898 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
MTHFRP42898 HLA-G-202ENST00000376815 851 ntBASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms