Protein–RNA interactions for Protein: P42826

XKS1, Xylulose kinase, yeastyeast

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
XKS1P42826 SSK2YNR031C 4740 nt1.85□□□□□ -2.11
XKS1P42826 tM(CAU)Q2tM(CAU)Q2 78 nt1.85□□□□□ -2.11
XKS1P42826 tT(UGU)HtT(UGU)H 72 nt1.85□□□□□ -2.11
XKS1P42826 LAA1YJL207C 6045 nt1.85□□□□□ -2.11
XKS1P42826 SET3YKR029C 2256 nt1.85□□□□□ -2.11
XKS1P42826 SXM1YDR395W 2835 nt1.85□□□□□ -2.11
XKS1P42826 STO1YMR125W 2586 nt1.84□□□□□ -2.11
XKS1P42826 SEC21YNL287W 2808 nt1.83□□□□□ -2.12
XKS1P42826 SWI4YER111C 3282 nt1.82□□□□□ -2.12
XKS1P42826 FYV10YIL097W 1551 nt1.81□□□□□ -2.12
XKS1P42826 CLU1YMR012W 3834 nt1.81□□□□□ -2.12
XKS1P42826 PKH3YDR466W 2697 nt1.81□□□□□ -2.12
XKS1P42826 YLR232WYLR232W 348 nt1.81□□□□□ -2.12
XKS1P42826 BPH1YCR032W 6504 nt1.81□□□□□ -2.12
XKS1P42826 NUP157YER105C 4176 nt1.8□□□□□ -2.12
XKS1P42826 snR190snR190 190 nt1.8□□□□□ -2.12
XKS1P42826 WAR1YML076C 2835 nt1.8□□□□□ -2.12
XKS1P42826 RPM2YML091C 3609 nt1.79□□□□□ -2.12
XKS1P42826 RPL26BYGR034W 384 nt1.79□□□□□ -2.12
XKS1P42826 YMR247W-AYMR247W-A 144 nt1.79□□□□□ -2.12
XKS1P42826 RCO1YMR075W 2055 nt1.79□□□□□ -2.12
XKS1P42826 NUP145YGL092W 3954 nt1.78□□□□□ -2.12
XKS1P42826 COG6YNL041C 2520 nt1.78□□□□□ -2.12
XKS1P42826 SEC3YER008C 4011 nt1.78□□□□□ -2.12
XKS1P42826 BST1YFL025C 3090 nt1.77□□□□□ -2.13
XKS1P42826 RAD9YDR217C 3930 nt1.77□□□□□ -2.13
XKS1P42826 IML1YJR138W 4755 nt1.77□□□□□ -2.13
XKS1P42826 MON2YNL297C 4911 nt1.77□□□□□ -2.13
XKS1P42826 APL3YBL037W 3078 nt1.77□□□□□ -2.13
XKS1P42826 tH(GUG)E1tH(GUG)E1 72 nt1.76□□□□□ -2.13
XKS1P42826 tH(GUG)E2tH(GUG)E2 72 nt1.76□□□□□ -2.13
XKS1P42826 tH(GUG)G1tH(GUG)G1 72 nt1.76□□□□□ -2.13
XKS1P42826 tH(GUG)G2tH(GUG)G2 72 nt1.76□□□□□ -2.13
XKS1P42826 tH(GUG)HtH(GUG)H 72 nt1.76□□□□□ -2.13
XKS1P42826 tH(GUG)KtH(GUG)K 72 nt1.76□□□□□ -2.13
XKS1P42826 tH(GUG)MtH(GUG)M 72 nt1.76□□□□□ -2.13
XKS1P42826 YBR200W-AYBR200W-A 165 nt1.75□□□□□ -2.13
XKS1P42826 KAP120YPL125W 3099 nt1.75□□□□□ -2.13
XKS1P42826 ASE1YOR058C 2658 nt1.74□□□□□ -2.13
XKS1P42826 YDR210WYDR210W 228 nt1.74□□□□□ -2.13
XKS1P42826 YJL127W-AYJL127W-A 117 nt1.74□□□□□ -2.13
XKS1P42826 PIK1YNL267W 3201 nt1.72□□□□□ -2.13
XKS1P42826 YGR146C-AYGR146C-A 162 nt1.71□□□□□ -2.14
XKS1P42826 YIL142C-AYIL142C-A 333 nt1.71□□□□□ -2.14
XKS1P42826 TRM732YMR259C 4263 nt1.7□□□□□ -2.14
XKS1P42826 BIR1YJR089W 2865 nt1.7□□□□□ -2.14
XKS1P42826 FIG2YCR089W 4830 nt1.7□□□□□ -2.14
XKS1P42826 GEA2YEL022W 4380 nt1.69□□□□□ -2.14
XKS1P42826 tS(GCU)Q1tS(GCU)Q1 86 nt1.69□□□□□ -2.14
XKS1P42826 AZF1YOR113W 2745 nt1.69□□□□□ -2.14
XKS1P42826 EST2YLR318W 2655 nt1.69□□□□□ -2.14
XKS1P42826 SEC1YDR164C 2175 nt1.67□□□□□ -2.14
XKS1P42826 PAU12YGR294W 363 nt1.66□□□□□ -2.14
XKS1P42826 PAU24YBR301W 363 nt1.66□□□□□ -2.14
XKS1P42826 SPC110YDR356W 2835 nt1.66□□□□□ -2.14
XKS1P42826 SEC8YPR055W 3198 nt1.65□□□□□ -2.14
XKS1P42826 MSN5YDR335W 3675 nt1.65□□□□□ -2.15
XKS1P42826 NUP188YML103C 4968 nt1.65□□□□□ -2.15
XKS1P42826 snR81snR81 201 nt1.65□□□□□ -2.15
XKS1P42826 YNL266WYNL266W 420 nt1.65□□□□□ -2.15
XKS1P42826 IRA1YBR140C 9279 nt1.64□□□□□ -2.15
XKS1P42826 YAL037C-AYAL037C-A 93 nt1.63□□□□□ -2.15
XKS1P42826 YBR072C-AYBR072C-A 162 nt1.63□□□□□ -2.15
XKS1P42826 YDL073WYDL073W 2955 nt1.61□□□□□ -2.15
XKS1P42826 YLL066W-BYLL066W-B 171 nt1.6□□□□□ -2.15
XKS1P42826 PRP16YKR086W 3216 nt1.6□□□□□ -2.15
XKS1P42826 YLR399W-AYLR399W-A 105 nt1.59□□□□□ -2.15
XKS1P42826 VPS15YBR097W 4365 nt1.58□□□□□ -2.16
XKS1P42826 tQ(UUG)E2tQ(UUG)E2 72 nt1.57□□□□□ -2.16
XKS1P42826 tV(UAC)BtV(UAC)B 74 nt1.57□□□□□ -2.16
XKS1P42826 tV(UAC)DtV(UAC)D 74 nt1.57□□□□□ -2.16
XKS1P42826 BEM3YPL115C 3387 nt1.56□□□□□ -2.16
XKS1P42826 SIP4YJL089W 2490 nt1.56□□□□□ -2.16
XKS1P42826 snR45snR45 172 nt1.56□□□□□ -2.16
XKS1P42826 CDC39YCR093W 6327 nt1.55□□□□□ -2.16
XKS1P42826 YPR160W-AYPR160W-A 81 nt1.55□□□□□ -2.16
XKS1P42826 tN(GUU)QtN(GUU)Q 71 nt1.53□□□□□ -2.16
XKS1P42826 YSP1YHR155W 3687 nt1.52□□□□□ -2.17
XKS1P42826 HKR1YDR420W 5409 nt1.51□□□□□ -2.17
XKS1P42826 FYV8YGR196C 2454 nt1.5□□□□□ -2.17
XKS1P42826 PET127YOR017W 2403 nt1.48□□□□□ -2.17
XKS1P42826 snR62snR62 100 nt1.48□□□□□ -2.17
XKS1P42826 YOL083C-AYOL083C-A 141 nt1.48□□□□□ -2.17
XKS1P42826 UBP3YER151C 2739 nt1.47□□□□□ -2.17
XKS1P42826 ULP2YIL031W 3105 nt1.47□□□□□ -2.17
XKS1P42826 YBR196C-AYBR196C-A 150 nt1.47□□□□□ -2.17
XKS1P42826 NNF2YGR089W 2811 nt1.46□□□□□ -2.18
XKS1P42826 GLG1YKR058W 1851 nt1.46□□□□□ -2.18
XKS1P42826 YBL071C-BYBL071C-B 99 nt1.44□□□□□ -2.18
XKS1P42826 SEC10YLR166C 2616 nt1.44□□□□□ -2.18
XKS1P42826 tF(GAA)BtF(GAA)B 73 nt1.38□□□□□ -2.19
XKS1P42826 tF(GAA)FtF(GAA)F 73 nt1.38□□□□□ -2.19
XKS1P42826 tF(GAA)GtF(GAA)G 73 nt1.38□□□□□ -2.19
XKS1P42826 tF(GAA)H1tF(GAA)H1 73 nt1.38□□□□□ -2.19
XKS1P42826 tF(GAA)H2tF(GAA)H2 73 nt1.38□□□□□ -2.19
XKS1P42826 tF(GAA)MtF(GAA)M 73 nt1.38□□□□□ -2.19
XKS1P42826 tF(GAA)P1tF(GAA)P1 73 nt1.38□□□□□ -2.19
XKS1P42826 tF(GAA)P2tF(GAA)P2 73 nt1.38□□□□□ -2.19
XKS1P42826 RPS26AYGL189C 360 nt1.38□□□□□ -2.19
XKS1P42826 YBL100W-CYBL100W-C 120 nt1.36□□□□□ -2.19
Retrieved 100 of 7,029 protein–RNA pairs in 12.9 ms