Protein–RNA interactions for Protein: P39986

SPF1, Manganese-transporting ATPase 1, yeastyeast

Known RBP Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPF1P39986 CDC31YOR257W 486 nt1.47□□□□□ -2.17
SPF1P39986 KAP120YPL125W 3099 nt1.46□□□□□ -2.18
SPF1P39986 SSK2YNR031C 4740 nt1.46□□□□□ -2.18
SPF1P39986 YLR232WYLR232W 348 nt1.45□□□□□ -2.18
SPF1P39986 CCH1YGR217W 6120 nt1.45□□□□□ -2.18
SPF1P39986 tQ(UUG)E2tQ(UUG)E2 72 nt1.44□□□□□ -2.18
SPF1P39986 YLR399W-AYLR399W-A 105 nt1.44□□□□□ -2.18
SPF1P39986 PET127YOR017W 2403 nt1.44□□□□□ -2.18
SPF1P39986 FYV8YGR196C 2454 nt1.43□□□□□ -2.18
SPF1P39986 RAD9YDR217C 3930 nt1.43□□□□□ -2.18
SPF1P39986 PRP16YKR086W 3216 nt1.42□□□□□ -2.18
SPF1P39986 tL(UAA)QtL(UAA)Q 85 nt1.42□□□□□ -2.18
SPF1P39986 MSH3YCR092C 3057 nt1.4□□□□□ -2.19
SPF1P39986 PIK1YNL267W 3201 nt1.4□□□□□ -2.19
SPF1P39986 YHR131W-AYHR131W-A 246 nt1.39□□□□□ -2.19
SPF1P39986 YPR160W-AYPR160W-A 81 nt1.39□□□□□ -2.19
SPF1P39986 HKR1YDR420W 5409 nt1.38□□□□□ -2.19
SPF1P39986 YOR329W-AYOR329W-A 210 nt1.37□□□□□ -2.19
SPF1P39986 BEM3YPL115C 3387 nt1.35□□□□□ -2.19
SPF1P39986 tM(CAU)Q2tM(CAU)Q2 78 nt1.34□□□□□ -2.19
SPF1P39986 RPM2YML091C 3609 nt1.33□□□□□ -2.2
SPF1P39986 QCR9YGR183C 201 nt1.32□□□□□ -2.2
SPF1P39986 YNL067W-BYNL067W-B 141 nt1.32□□□□□ -2.2
SPF1P39986 YSP1YHR155W 3687 nt1.31□□□□□ -2.2
SPF1P39986 tH(GUG)E1tH(GUG)E1 72 nt1.31□□□□□ -2.2
SPF1P39986 tH(GUG)E2tH(GUG)E2 72 nt1.31□□□□□ -2.2
SPF1P39986 tH(GUG)G1tH(GUG)G1 72 nt1.31□□□□□ -2.2
SPF1P39986 tH(GUG)G2tH(GUG)G2 72 nt1.31□□□□□ -2.2
SPF1P39986 tH(GUG)HtH(GUG)H 72 nt1.31□□□□□ -2.2
SPF1P39986 tH(GUG)KtH(GUG)K 72 nt1.31□□□□□ -2.2
SPF1P39986 tH(GUG)MtH(GUG)M 72 nt1.31□□□□□ -2.2
SPF1P39986 SPT7YBR081C 3999 nt1.31□□□□□ -2.2
SPF1P39986 UBP3YER151C 2739 nt1.31□□□□□ -2.2
SPF1P39986 YDR544CYDR544C 429 nt1.3□□□□□ -2.2
SPF1P39986 tN(GUU)QtN(GUU)Q 71 nt1.3□□□□□ -2.2
SPF1P39986 YCL001W-BYCL001W-B 255 nt1.3□□□□□ -2.2
SPF1P39986 LAA1YJL207C 6045 nt1.3□□□□□ -2.2
SPF1P39986 YDL073WYDL073W 2955 nt1.28□□□□□ -2.2
SPF1P39986 YCR095W-AYCR095W-A 159 nt1.25□□□□□ -2.21
SPF1P39986 YGR130CYGR130C 2451 nt1.25□□□□□ -2.21
SPF1P39986 COG6YNL041C 2520 nt1.24□□□□□ -2.21
SPF1P39986 OST4YDL232W 111 nt1.24□□□□□ -2.21
SPF1P39986 Q0143Q0143 153 nt1.24□□□□□ -2.21
SPF1P39986 snR39BsnR39B 96 nt1.24□□□□□ -2.21
SPF1P39986 SOM1YEL059C-A 225 nt1.21□□□□□ -2.22
SPF1P39986 IML1YJR138W 4755 nt1.21□□□□□ -2.22
SPF1P39986 YNL284C-BYNL284C-B 5268 nt1.21□□□□□ -2.22
SPF1P39986 SCC2YDR180W 4482 nt1.21□□□□□ -2.22
SPF1P39986 NST1YNL091W 3723 nt1.19□□□□□ -2.22
SPF1P39986 YDR210WYDR210W 228 nt1.19□□□□□ -2.22
SPF1P39986 YJL127W-AYJL127W-A 117 nt1.19□□□□□ -2.22
SPF1P39986 tV(UAC)BtV(UAC)B 74 nt1.17□□□□□ -2.22
SPF1P39986 tV(UAC)DtV(UAC)D 74 nt1.17□□□□□ -2.22
SPF1P39986 YBR072C-AYBR072C-A 162 nt1.17□□□□□ -2.22
SPF1P39986 ULP2YIL031W 3105 nt1.16□□□□□ -2.22
SPF1P39986 GLG1YKR058W 1851 nt1.16□□□□□ -2.22
SPF1P39986 STF2YGR008C 255 nt1.16□□□□□ -2.22
SPF1P39986 YGR146C-AYGR146C-A 162 nt1.16□□□□□ -2.22
SPF1P39986 HUG1YML058W-A 207 nt1.16□□□□□ -2.22
SPF1P39986 YBR099CYBR099C 384 nt1.16□□□□□ -2.22
SPF1P39986 SIP4YJL089W 2490 nt1.14□□□□□ -2.23
SPF1P39986 SEC1YDR164C 2175 nt1.13□□□□□ -2.23
SPF1P39986 YPR117WYPR117W 7470 nt1.12□□□□□ -2.23
SPF1P39986 snR85snR85 171 nt1.1□□□□□ -2.23
SPF1P39986 YIL071W-AYIL071W-A 477 nt1.1□□□□□ -2.23
SPF1P39986 RKR1YMR247C 4689 nt1.1□□□□□ -2.23
SPF1P39986 YNL205CYNL205C 423 nt1.09□□□□□ -2.23
SPF1P39986 LTE1YAL024C 4308 nt1.08□□□□□ -2.24
SPF1P39986 YJR029WYJR029W 5268 nt1.08□□□□□ -2.24
SPF1P39986 YPR137C-BYPR137C-B 5268 nt1.08□□□□□ -2.24
SPF1P39986 YLL006W-AYLL006W-A 177 nt1.08□□□□□ -2.24
SPF1P39986 NNF2YGR089W 2811 nt1.07□□□□□ -2.24
SPF1P39986 VAM6YDL077C 3150 nt1.07□□□□□ -2.24
SPF1P39986 BUD3YCL014W 4911 nt1.03□□□□□ -2.25
SPF1P39986 BEM2YER155C 6504 nt1.02□□□□□ -2.25
SPF1P39986 BIR1YJR089W 2865 nt1□□□□□ -2.25
SPF1P39986 CSE1YGL238W 2883 nt0.98□□□□□ -2.25
SPF1P39986 EMT1tM(CAU)D 73 nt0.98□□□□□ -2.25
SPF1P39986 EMT5tM(CAU)J1 73 nt0.98□□□□□ -2.25
SPF1P39986 EMT3tM(CAU)J2 73 nt0.98□□□□□ -2.25
SPF1P39986 EMT4tM(CAU)M 73 nt0.98□□□□□ -2.25
SPF1P39986 EMT2tM(CAU)O2 73 nt0.98□□□□□ -2.25
SPF1P39986 DOP1YDR141C 5097 nt0.98□□□□□ -2.25
SPF1P39986 PMP2YEL017C-A 132 nt0.97□□□□□ -2.25
SPF1P39986 PET111YMR257C 2403 nt0.96□□□□□ -2.26
SPF1P39986 NIP1YMR309C 2439 nt0.95□□□□□ -2.26
SPF1P39986 YNL266WYNL266W 420 nt0.94□□□□□ -2.26
SPF1P39986 YOR192C-BYOR192C-B 5313 nt0.92□□□□□ -2.26
SPF1P39986 BUL2YML111W 2763 nt0.9□□□□□ -2.27
SPF1P39986 RPS26AYGL189C 360 nt0.88□□□□□ -2.27
SPF1P39986 MLP1YKR095W 5628 nt0.88□□□□□ -2.27
SPF1P39986 YNL103W-AYNL103W-A 90 nt0.87□□□□□ -2.27
SPF1P39986 snR61snR61 90 nt0.86□□□□□ -2.27
SPF1P39986 PAU12YGR294W 363 nt0.86□□□□□ -2.27
SPF1P39986 YBR178WYBR178W 375 nt0.86□□□□□ -2.27
SPF1P39986 PAU24YBR301W 363 nt0.86□□□□□ -2.27
SPF1P39986 YDR371C-AYDR371C-A 105 nt0.85□□□□□ -2.27
SPF1P39986 SEC10YLR166C 2616 nt0.84□□□□□ -2.27
SPF1P39986 YPR159C-AYPR159C-A 102 nt0.82□□□□□ -2.28
SPF1P39986 RCO1YMR075W 2055 nt0.82□□□□□ -2.28
Retrieved 100 of 7,029 protein–RNA pairs in 29 ms